Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Cdhr1Q8VHP6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
Cdhr1Q8VHP6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cdhr1Q8VHP6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cdhr1Q8VHP6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cdhr1Q8VHP6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cdhr1Q8VHP6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cdhr1Q8VHP6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cdhr1Q8VHP6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Cdhr1Q8VHP6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cdhr1Q8VHP6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cdhr1Q8VHP6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cdhr1Q8VHP6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cdhr1Q8VHP6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.88■■□□□ 1.41
Cdhr1Q8VHP6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cdhr1Q8VHP6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.87■■□□□ 1.41
Cdhr1Q8VHP6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cdhr1Q8VHP6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
Cdhr1Q8VHP6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cdhr1Q8VHP6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cdhr1Q8VHP6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cdhr1Q8VHP6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.83■■□□□ 1.41
Cdhr1Q8VHP6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cdhr1Q8VHP6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Cdhr1Q8VHP6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cdhr1Q8VHP6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.81■■□□□ 1.4
Cdhr1Q8VHP6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.81■■□□□ 1.4
Cdhr1Q8VHP6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdhr1Q8VHP6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cdhr1Q8VHP6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cdhr1Q8VHP6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
Cdhr1Q8VHP6 Gm7432-201ENSMUST00000210343 879 ntBASIC23.78■■□□□ 1.4
Cdhr1Q8VHP6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdhr1Q8VHP6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdhr1Q8VHP6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdhr1Q8VHP6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cdhr1Q8VHP6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.76■■□□□ 1.39
Cdhr1Q8VHP6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdhr1Q8VHP6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cdhr1Q8VHP6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Cdhr1Q8VHP6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdhr1Q8VHP6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdhr1Q8VHP6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdhr1Q8VHP6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cdhr1Q8VHP6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Cdhr1Q8VHP6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.72■■□□□ 1.39
Cdhr1Q8VHP6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.71■■□□□ 1.39
Cdhr1Q8VHP6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Cdhr1Q8VHP6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cdhr1Q8VHP6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.7■■□□□ 1.38
Cdhr1Q8VHP6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Cdhr1Q8VHP6 Zxda-201ENSMUST00000117281 2621 ntBASIC23.7■■□□□ 1.38
Cdhr1Q8VHP6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Cdhr1Q8VHP6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.69■■□□□ 1.38
Cdhr1Q8VHP6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cdhr1Q8VHP6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cdhr1Q8VHP6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cdhr1Q8VHP6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cdhr1Q8VHP6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cdhr1Q8VHP6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cdhr1Q8VHP6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cdhr1Q8VHP6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Cdhr1Q8VHP6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.66■■□□□ 1.38
Cdhr1Q8VHP6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.65■■□□□ 1.38
Cdhr1Q8VHP6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Cdhr1Q8VHP6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Cdhr1Q8VHP6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Cdhr1Q8VHP6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cdhr1Q8VHP6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cdhr1Q8VHP6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.64■■□□□ 1.37
Cdhr1Q8VHP6 Gm11599-201ENSMUST00000118720 878 ntBASIC23.63■■□□□ 1.37
Cdhr1Q8VHP6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.62■■□□□ 1.37
Cdhr1Q8VHP6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.62■■□□□ 1.37
Cdhr1Q8VHP6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.62■■□□□ 1.37
Cdhr1Q8VHP6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.61■■□□□ 1.37
Cdhr1Q8VHP6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.61■■□□□ 1.37
Cdhr1Q8VHP6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cdhr1Q8VHP6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cdhr1Q8VHP6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Cdhr1Q8VHP6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cdhr1Q8VHP6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.6■■□□□ 1.37
Cdhr1Q8VHP6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.6■■□□□ 1.37
Cdhr1Q8VHP6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cdhr1Q8VHP6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cdhr1Q8VHP6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cdhr1Q8VHP6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cdhr1Q8VHP6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.58■■□□□ 1.37
Cdhr1Q8VHP6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cdhr1Q8VHP6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Cdhr1Q8VHP6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cdhr1Q8VHP6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.56■■□□□ 1.36
Cdhr1Q8VHP6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cdhr1Q8VHP6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cdhr1Q8VHP6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cdhr1Q8VHP6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cdhr1Q8VHP6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cdhr1Q8VHP6 Gm30023-201ENSMUST00000197970 889 ntBASIC23.54■■□□□ 1.36
Cdhr1Q8VHP6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.54■■□□□ 1.36
Cdhr1Q8VHP6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Cdhr1Q8VHP6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms