Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sft2d2Q8VD57 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sft2d2Q8VD57 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sft2d2Q8VD57 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.53■□□□□ 0.72
Sft2d2Q8VD57 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
Sft2d2Q8VD57 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sft2d2Q8VD57 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sft2d2Q8VD57 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sft2d2Q8VD57 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Sft2d2Q8VD57 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sft2d2Q8VD57 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sft2d2Q8VD57 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sft2d2Q8VD57 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sft2d2Q8VD57 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sft2d2Q8VD57 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sft2d2Q8VD57 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sft2d2Q8VD57 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sft2d2Q8VD57 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sft2d2Q8VD57 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sft2d2Q8VD57 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sft2d2Q8VD57 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sft2d2Q8VD57 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sft2d2Q8VD57 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sft2d2Q8VD57 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sft2d2Q8VD57 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sft2d2Q8VD57 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.48■□□□□ 0.71
Sft2d2Q8VD57 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sft2d2Q8VD57 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sft2d2Q8VD57 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sft2d2Q8VD57 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sft2d2Q8VD57 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.46■□□□□ 0.71
Sft2d2Q8VD57 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sft2d2Q8VD57 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sft2d2Q8VD57 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sft2d2Q8VD57 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sft2d2Q8VD57 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sft2d2Q8VD57 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sft2d2Q8VD57 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.43■□□□□ 0.7
Sft2d2Q8VD57 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sft2d2Q8VD57 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Sft2d2Q8VD57 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.43■□□□□ 0.7
Sft2d2Q8VD57 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sft2d2Q8VD57 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sft2d2Q8VD57 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Sft2d2Q8VD57 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sft2d2Q8VD57 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.42■□□□□ 0.7
Sft2d2Q8VD57 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sft2d2Q8VD57 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Sft2d2Q8VD57 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sft2d2Q8VD57 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sft2d2Q8VD57 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Sft2d2Q8VD57 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
Sft2d2Q8VD57 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sft2d2Q8VD57 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sft2d2Q8VD57 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sft2d2Q8VD57 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sft2d2Q8VD57 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sft2d2Q8VD57 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Sft2d2Q8VD57 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sft2d2Q8VD57 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sft2d2Q8VD57 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sft2d2Q8VD57 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sft2d2Q8VD57 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sft2d2Q8VD57 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
Sft2d2Q8VD57 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sft2d2Q8VD57 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.35■□□□□ 0.69
Sft2d2Q8VD57 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.34■□□□□ 0.69
Sft2d2Q8VD57 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Sft2d2Q8VD57 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sft2d2Q8VD57 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sft2d2Q8VD57 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.33■□□□□ 0.68
Sft2d2Q8VD57 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sft2d2Q8VD57 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sft2d2Q8VD57 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sft2d2Q8VD57 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Sft2d2Q8VD57 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sft2d2Q8VD57 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sft2d2Q8VD57 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sft2d2Q8VD57 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sft2d2Q8VD57 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sft2d2Q8VD57 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.31■□□□□ 0.68
Sft2d2Q8VD57 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sft2d2Q8VD57 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sft2d2Q8VD57 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sft2d2Q8VD57 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sft2d2Q8VD57 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sft2d2Q8VD57 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sft2d2Q8VD57 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sft2d2Q8VD57 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sft2d2Q8VD57 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sft2d2Q8VD57 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sft2d2Q8VD57 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sft2d2Q8VD57 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.26■□□□□ 0.67
Sft2d2Q8VD57 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sft2d2Q8VD57 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sft2d2Q8VD57 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sft2d2Q8VD57 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.25■□□□□ 0.67
Sft2d2Q8VD57 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sft2d2Q8VD57 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sft2d2Q8VD57 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms