Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Cuedc1Q8R3V6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.78■■□□□ 1.08
Cuedc1Q8R3V6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cuedc1Q8R3V6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cuedc1Q8R3V6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Cuedc1Q8R3V6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cuedc1Q8R3V6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cuedc1Q8R3V6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cuedc1Q8R3V6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cuedc1Q8R3V6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cuedc1Q8R3V6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cuedc1Q8R3V6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cuedc1Q8R3V6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cuedc1Q8R3V6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Cuedc1Q8R3V6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cuedc1Q8R3V6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.73■■□□□ 1.07
Cuedc1Q8R3V6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cuedc1Q8R3V6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cuedc1Q8R3V6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cuedc1Q8R3V6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.71■■□□□ 1.07
Cuedc1Q8R3V6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cuedc1Q8R3V6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cuedc1Q8R3V6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Cuedc1Q8R3V6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cuedc1Q8R3V6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cuedc1Q8R3V6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cuedc1Q8R3V6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cuedc1Q8R3V6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cuedc1Q8R3V6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cuedc1Q8R3V6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cuedc1Q8R3V6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cuedc1Q8R3V6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Cuedc1Q8R3V6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cuedc1Q8R3V6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.66■■□□□ 1.06
Cuedc1Q8R3V6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cuedc1Q8R3V6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cuedc1Q8R3V6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cuedc1Q8R3V6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cuedc1Q8R3V6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cuedc1Q8R3V6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cuedc1Q8R3V6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cuedc1Q8R3V6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cuedc1Q8R3V6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cuedc1Q8R3V6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cuedc1Q8R3V6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cuedc1Q8R3V6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cuedc1Q8R3V6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cuedc1Q8R3V6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cuedc1Q8R3V6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cuedc1Q8R3V6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cuedc1Q8R3V6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.62■■□□□ 1.05
Cuedc1Q8R3V6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cuedc1Q8R3V6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cuedc1Q8R3V6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cuedc1Q8R3V6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.61■■□□□ 1.05
Cuedc1Q8R3V6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cuedc1Q8R3V6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cuedc1Q8R3V6 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.59■■□□□ 1.05
Cuedc1Q8R3V6 Gm11175-201ENSMUST00000116172 543 ntBASIC21.59■■□□□ 1.05
Cuedc1Q8R3V6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
Cuedc1Q8R3V6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
Cuedc1Q8R3V6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cuedc1Q8R3V6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cuedc1Q8R3V6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.58■■□□□ 1.05
Cuedc1Q8R3V6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cuedc1Q8R3V6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cuedc1Q8R3V6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cuedc1Q8R3V6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cuedc1Q8R3V6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cuedc1Q8R3V6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.56■■□□□ 1.04
Cuedc1Q8R3V6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cuedc1Q8R3V6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cuedc1Q8R3V6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.54■■□□□ 1.04
Cuedc1Q8R3V6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cuedc1Q8R3V6 Cap2-205ENSMUST00000225824 1634 ntBASIC21.54■■□□□ 1.04
Cuedc1Q8R3V6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cuedc1Q8R3V6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cuedc1Q8R3V6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.53■■□□□ 1.04
Cuedc1Q8R3V6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
Cuedc1Q8R3V6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cuedc1Q8R3V6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cuedc1Q8R3V6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cuedc1Q8R3V6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.51■■□□□ 1.03
Cuedc1Q8R3V6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cuedc1Q8R3V6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cuedc1Q8R3V6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cuedc1Q8R3V6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cuedc1Q8R3V6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cuedc1Q8R3V6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.49■■□□□ 1.03
Cuedc1Q8R3V6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cuedc1Q8R3V6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cuedc1Q8R3V6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cuedc1Q8R3V6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cuedc1Q8R3V6 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.47■■□□□ 1.03
Cuedc1Q8R3V6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cuedc1Q8R3V6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cuedc1Q8R3V6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cuedc1Q8R3V6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.46■■□□□ 1.03
Cuedc1Q8R3V6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cuedc1Q8R3V6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms