Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.25■■□□□ 1.47
Alms1Q8K4E0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Alms1Q8K4E0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Alms1Q8K4E0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.25■■□□□ 1.47
Alms1Q8K4E0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.24■■□□□ 1.47
Alms1Q8K4E0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Alms1Q8K4E0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Alms1Q8K4E0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Alms1Q8K4E0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Alms1Q8K4E0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Alms1Q8K4E0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Alms1Q8K4E0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Alms1Q8K4E0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Alms1Q8K4E0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Alms1Q8K4E0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Alms1Q8K4E0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
Alms1Q8K4E0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Alms1Q8K4E0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Alms1Q8K4E0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Alms1Q8K4E0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Alms1Q8K4E0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Alms1Q8K4E0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.17■■□□□ 1.46
Alms1Q8K4E0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Alms1Q8K4E0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Alms1Q8K4E0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.15■■□□□ 1.46
Alms1Q8K4E0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.15■■□□□ 1.46
Alms1Q8K4E0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Alms1Q8K4E0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Alms1Q8K4E0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.13■■□□□ 1.45
Alms1Q8K4E0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.13■■□□□ 1.45
Alms1Q8K4E0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.12■■□□□ 1.45
Alms1Q8K4E0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Alms1Q8K4E0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Alms1Q8K4E0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.09■■□□□ 1.45
Alms1Q8K4E0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Alms1Q8K4E0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Alms1Q8K4E0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Alms1Q8K4E0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Alms1Q8K4E0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Alms1Q8K4E0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Alms1Q8K4E0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Alms1Q8K4E0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.07■■□□□ 1.44
Alms1Q8K4E0 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.07■■□□□ 1.44
Alms1Q8K4E0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Alms1Q8K4E0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Alms1Q8K4E0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Alms1Q8K4E0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Alms1Q8K4E0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Alms1Q8K4E0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Alms1Q8K4E0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Alms1Q8K4E0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.04■■□□□ 1.44
Alms1Q8K4E0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Alms1Q8K4E0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Alms1Q8K4E0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Alms1Q8K4E0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Alms1Q8K4E0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.03■■□□□ 1.44
Alms1Q8K4E0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.03■■□□□ 1.44
Alms1Q8K4E0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Alms1Q8K4E0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.02■■□□□ 1.44
Alms1Q8K4E0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Alms1Q8K4E0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Alms1Q8K4E0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Alms1Q8K4E0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Alms1Q8K4E0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Alms1Q8K4E0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Alms1Q8K4E0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Alms1Q8K4E0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Alms1Q8K4E0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Alms1Q8K4E0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Alms1Q8K4E0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Alms1Q8K4E0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Alms1Q8K4E0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Alms1Q8K4E0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Alms1Q8K4E0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Alms1Q8K4E0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Alms1Q8K4E0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.94■■□□□ 1.42
Alms1Q8K4E0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Alms1Q8K4E0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Alms1Q8K4E0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Alms1Q8K4E0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Alms1Q8K4E0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.91■■□□□ 1.42
Alms1Q8K4E0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.91■■□□□ 1.42
Alms1Q8K4E0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Alms1Q8K4E0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.9■■□□□ 1.42
Alms1Q8K4E0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Alms1Q8K4E0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Alms1Q8K4E0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Alms1Q8K4E0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Alms1Q8K4E0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.88■■□□□ 1.41
Alms1Q8K4E0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Alms1Q8K4E0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Alms1Q8K4E0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Alms1Q8K4E0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.85■■□□□ 1.41
Alms1Q8K4E0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Alms1Q8K4E0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Alms1Q8K4E0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.84■■□□□ 1.41
Alms1Q8K4E0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Alms1Q8K4E0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Alms1Q8K4E0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Alms1Q8K4E0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms