Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
Trim68Q8K243 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Trim68Q8K243 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.17■■□□□ 1.78
Trim68Q8K243 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim68Q8K243 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim68Q8K243 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim68Q8K243 Mir6538-201ENSMUST00000183713 110 ntBASIC26.15■■□□□ 1.78
Trim68Q8K243 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trim68Q8K243 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Trim68Q8K243 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trim68Q8K243 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.14■■□□□ 1.77
Trim68Q8K243 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim68Q8K243 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim68Q8K243 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim68Q8K243 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.12■■□□□ 1.77
Trim68Q8K243 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.11■■□□□ 1.77
Trim68Q8K243 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim68Q8K243 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trim68Q8K243 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trim68Q8K243 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trim68Q8K243 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim68Q8K243 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim68Q8K243 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim68Q8K243 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim68Q8K243 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim68Q8K243 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim68Q8K243 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.07■■□□□ 1.76
Trim68Q8K243 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trim68Q8K243 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.06■■□□□ 1.76
Trim68Q8K243 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Trim68Q8K243 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim68Q8K243 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim68Q8K243 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trim68Q8K243 Cap2-205ENSMUST00000225824 1634 ntBASIC26.03■■□□□ 1.76
Trim68Q8K243 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Trim68Q8K243 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
Trim68Q8K243 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.03■■□□□ 1.76
Trim68Q8K243 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.02■■□□□ 1.76
Trim68Q8K243 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Trim68Q8K243 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Trim68Q8K243 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.01■■□□□ 1.75
Trim68Q8K243 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.01■■□□□ 1.75
Trim68Q8K243 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Trim68Q8K243 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Trim68Q8K243 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trim68Q8K243 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim68Q8K243 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim68Q8K243 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim68Q8K243 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.98■■□□□ 1.75
Trim68Q8K243 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trim68Q8K243 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Trim68Q8K243 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Trim68Q8K243 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Trim68Q8K243 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.97■■□□□ 1.75
Trim68Q8K243 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.95■■□□□ 1.75
Trim68Q8K243 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.95■■□□□ 1.75
Trim68Q8K243 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trim68Q8K243 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim68Q8K243 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.94■■□□□ 1.74
Trim68Q8K243 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim68Q8K243 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim68Q8K243 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Trim68Q8K243 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim68Q8K243 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim68Q8K243 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trim68Q8K243 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.9■■□□□ 1.74
Trim68Q8K243 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.9■■□□□ 1.74
Trim68Q8K243 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Trim68Q8K243 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.89■■□□□ 1.74
Trim68Q8K243 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Trim68Q8K243 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Trim68Q8K243 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Trim68Q8K243 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trim68Q8K243 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Trim68Q8K243 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trim68Q8K243 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.87■■□□□ 1.73
Trim68Q8K243 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim68Q8K243 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Trim68Q8K243 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim68Q8K243 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.84■■□□□ 1.73
Trim68Q8K243 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.84■■□□□ 1.73
Trim68Q8K243 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Trim68Q8K243 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Trim68Q8K243 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Trim68Q8K243 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trim68Q8K243 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trim68Q8K243 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim68Q8K243 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim68Q8K243 Gm6311-201ENSMUST00000073790 878 ntBASIC25.8■■□□□ 1.72
Trim68Q8K243 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.8■■□□□ 1.72
Trim68Q8K243 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim68Q8K243 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Trim68Q8K243 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Trim68Q8K243 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim68Q8K243 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim68Q8K243 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Trim68Q8K243 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim68Q8K243 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Trim68Q8K243 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim68Q8K243 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms