Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist3h2bbQ8CGP0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist3h2bbQ8CGP0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.63■□□□□ 0.57
Hist3h2bbQ8CGP0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist3h2bbQ8CGP0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist3h2bbQ8CGP0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist3h2bbQ8CGP0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hist3h2bbQ8CGP0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hist3h2bbQ8CGP0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.61■□□□□ 0.57
Hist3h2bbQ8CGP0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hist3h2bbQ8CGP0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hist3h2bbQ8CGP0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hist3h2bbQ8CGP0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hist3h2bbQ8CGP0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hist3h2bbQ8CGP0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hist3h2bbQ8CGP0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hist3h2bbQ8CGP0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hist3h2bbQ8CGP0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hist3h2bbQ8CGP0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hist3h2bbQ8CGP0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hist3h2bbQ8CGP0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist3h2bbQ8CGP0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist3h2bbQ8CGP0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist3h2bbQ8CGP0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist3h2bbQ8CGP0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hist3h2bbQ8CGP0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist3h2bbQ8CGP0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist3h2bbQ8CGP0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist3h2bbQ8CGP0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hist3h2bbQ8CGP0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist3h2bbQ8CGP0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist3h2bbQ8CGP0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hist3h2bbQ8CGP0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist3h2bbQ8CGP0 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.53■□□□□ 0.56
Hist3h2bbQ8CGP0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist3h2bbQ8CGP0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.52■□□□□ 0.56
Hist3h2bbQ8CGP0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hist3h2bbQ8CGP0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hist3h2bbQ8CGP0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hist3h2bbQ8CGP0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hist3h2bbQ8CGP0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist3h2bbQ8CGP0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist3h2bbQ8CGP0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Hist3h2bbQ8CGP0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.5■□□□□ 0.55
Hist3h2bbQ8CGP0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hist3h2bbQ8CGP0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hist3h2bbQ8CGP0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.49■□□□□ 0.55
Hist3h2bbQ8CGP0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hist3h2bbQ8CGP0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hist3h2bbQ8CGP0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hist3h2bbQ8CGP0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hist3h2bbQ8CGP0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hist3h2bbQ8CGP0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hist3h2bbQ8CGP0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hist3h2bbQ8CGP0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hist3h2bbQ8CGP0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hist3h2bbQ8CGP0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hist3h2bbQ8CGP0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Hist3h2bbQ8CGP0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist3h2bbQ8CGP0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist3h2bbQ8CGP0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist3h2bbQ8CGP0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist3h2bbQ8CGP0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist3h2bbQ8CGP0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist3h2bbQ8CGP0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist3h2bbQ8CGP0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist3h2bbQ8CGP0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hist3h2bbQ8CGP0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hist3h2bbQ8CGP0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist3h2bbQ8CGP0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hist3h2bbQ8CGP0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.43■□□□□ 0.54
Hist3h2bbQ8CGP0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hist3h2bbQ8CGP0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hist3h2bbQ8CGP0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist3h2bbQ8CGP0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist3h2bbQ8CGP0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist3h2bbQ8CGP0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hist3h2bbQ8CGP0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist3h2bbQ8CGP0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist3h2bbQ8CGP0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist3h2bbQ8CGP0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.41■□□□□ 0.54
Hist3h2bbQ8CGP0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist3h2bbQ8CGP0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist3h2bbQ8CGP0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist3h2bbQ8CGP0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist3h2bbQ8CGP0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.4■□□□□ 0.54
Hist3h2bbQ8CGP0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist3h2bbQ8CGP0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hist3h2bbQ8CGP0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hist3h2bbQ8CGP0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist3h2bbQ8CGP0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist3h2bbQ8CGP0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Hist3h2bbQ8CGP0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist3h2bbQ8CGP0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Hist3h2bbQ8CGP0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hist3h2bbQ8CGP0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hist3h2bbQ8CGP0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Hist3h2bbQ8CGP0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hist3h2bbQ8CGP0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist3h2bbQ8CGP0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 130.3 ms