Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.44■■■□□ 2.46
Smc5Q8CG46 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Smc5Q8CG46 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Smc5Q8CG46 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Smc5Q8CG46 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Smc5Q8CG46 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Smc5Q8CG46 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Smc5Q8CG46 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30.39■■■□□ 2.46
Smc5Q8CG46 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.39■■■□□ 2.45
Smc5Q8CG46 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Smc5Q8CG46 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Smc5Q8CG46 Gm24804-201ENSMUST00000174982 85 ntBASIC30.37■■■□□ 2.45
Smc5Q8CG46 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Smc5Q8CG46 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Smc5Q8CG46 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Smc5Q8CG46 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Smc5Q8CG46 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Smc5Q8CG46 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Smc5Q8CG46 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Smc5Q8CG46 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Smc5Q8CG46 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Smc5Q8CG46 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Smc5Q8CG46 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Smc5Q8CG46 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Smc5Q8CG46 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Smc5Q8CG46 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Smc5Q8CG46 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Smc5Q8CG46 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.3■■■□□ 2.44
Smc5Q8CG46 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Smc5Q8CG46 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.29■■■□□ 2.44
Smc5Q8CG46 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Smc5Q8CG46 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.29■■■□□ 2.44
Smc5Q8CG46 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Smc5Q8CG46 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Smc5Q8CG46 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.28■■■□□ 2.44
Smc5Q8CG46 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Smc5Q8CG46 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Smc5Q8CG46 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Smc5Q8CG46 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Smc5Q8CG46 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Smc5Q8CG46 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Smc5Q8CG46 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Smc5Q8CG46 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Smc5Q8CG46 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.24■■■□□ 2.43
Smc5Q8CG46 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Smc5Q8CG46 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.23■■■□□ 2.43
Smc5Q8CG46 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Smc5Q8CG46 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.22■■■□□ 2.43
Smc5Q8CG46 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Smc5Q8CG46 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Smc5Q8CG46 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Smc5Q8CG46 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Smc5Q8CG46 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Smc5Q8CG46 Gm16148-201ENSMUST00000119653 893 ntBASIC30.2■■■□□ 2.43
Smc5Q8CG46 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.19■■■□□ 2.42
Smc5Q8CG46 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Smc5Q8CG46 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Smc5Q8CG46 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Smc5Q8CG46 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Smc5Q8CG46 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Smc5Q8CG46 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
Smc5Q8CG46 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Smc5Q8CG46 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Smc5Q8CG46 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Smc5Q8CG46 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Smc5Q8CG46 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Smc5Q8CG46 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Smc5Q8CG46 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC30.06■■■□□ 2.4
Smc5Q8CG46 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Smc5Q8CG46 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Smc5Q8CG46 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Smc5Q8CG46 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
Smc5Q8CG46 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Smc5Q8CG46 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
Smc5Q8CG46 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Smc5Q8CG46 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Smc5Q8CG46 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Smc5Q8CG46 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Smc5Q8CG46 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Smc5Q8CG46 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Smc5Q8CG46 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.98■■■□□ 2.39
Smc5Q8CG46 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Smc5Q8CG46 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Smc5Q8CG46 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Smc5Q8CG46 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC29.95■■■□□ 2.39
Smc5Q8CG46 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Smc5Q8CG46 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Smc5Q8CG46 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Smc5Q8CG46 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Smc5Q8CG46 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
Smc5Q8CG46 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Smc5Q8CG46 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Smc5Q8CG46 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Smc5Q8CG46 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Smc5Q8CG46 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms