Protein–RNA interactions for Protein: Q8CE96

Trmt6, tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt6Q8CE96 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Trmt6Q8CE96 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trmt6Q8CE96 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trmt6Q8CE96 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trmt6Q8CE96 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.51■■□□□ 1.03
Trmt6Q8CE96 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Trmt6Q8CE96 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Trmt6Q8CE96 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trmt6Q8CE96 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trmt6Q8CE96 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trmt6Q8CE96 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trmt6Q8CE96 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trmt6Q8CE96 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trmt6Q8CE96 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trmt6Q8CE96 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trmt6Q8CE96 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trmt6Q8CE96 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trmt6Q8CE96 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trmt6Q8CE96 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trmt6Q8CE96 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Trmt6Q8CE96 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trmt6Q8CE96 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trmt6Q8CE96 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trmt6Q8CE96 Gm16148-201ENSMUST00000119653 893 ntBASIC21.46■■□□□ 1.03
Trmt6Q8CE96 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Trmt6Q8CE96 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trmt6Q8CE96 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.44■■□□□ 1.02
Trmt6Q8CE96 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trmt6Q8CE96 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trmt6Q8CE96 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trmt6Q8CE96 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trmt6Q8CE96 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trmt6Q8CE96 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trmt6Q8CE96 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trmt6Q8CE96 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trmt6Q8CE96 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trmt6Q8CE96 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trmt6Q8CE96 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trmt6Q8CE96 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Trmt6Q8CE96 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trmt6Q8CE96 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trmt6Q8CE96 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.41■■□□□ 1.02
Trmt6Q8CE96 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trmt6Q8CE96 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trmt6Q8CE96 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Trmt6Q8CE96 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trmt6Q8CE96 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trmt6Q8CE96 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trmt6Q8CE96 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trmt6Q8CE96 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trmt6Q8CE96 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.38■■□□□ 1.01
Trmt6Q8CE96 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trmt6Q8CE96 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.37■■□□□ 1.01
Trmt6Q8CE96 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trmt6Q8CE96 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trmt6Q8CE96 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trmt6Q8CE96 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trmt6Q8CE96 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.35■■□□□ 1.01
Trmt6Q8CE96 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.35■■□□□ 1.01
Trmt6Q8CE96 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trmt6Q8CE96 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Trmt6Q8CE96 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trmt6Q8CE96 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trmt6Q8CE96 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trmt6Q8CE96 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trmt6Q8CE96 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.31■■□□□ 1
Trmt6Q8CE96 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trmt6Q8CE96 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Trmt6Q8CE96 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Trmt6Q8CE96 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trmt6Q8CE96 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trmt6Q8CE96 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trmt6Q8CE96 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.29■■□□□ 1
Trmt6Q8CE96 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trmt6Q8CE96 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trmt6Q8CE96 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trmt6Q8CE96 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trmt6Q8CE96 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trmt6Q8CE96 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trmt6Q8CE96 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trmt6Q8CE96 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trmt6Q8CE96 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trmt6Q8CE96 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trmt6Q8CE96 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trmt6Q8CE96 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Trmt6Q8CE96 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trmt6Q8CE96 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Trmt6Q8CE96 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trmt6Q8CE96 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trmt6Q8CE96 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trmt6Q8CE96 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trmt6Q8CE96 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trmt6Q8CE96 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trmt6Q8CE96 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trmt6Q8CE96 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trmt6Q8CE96 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trmt6Q8CE96 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Trmt6Q8CE96 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trmt6Q8CE96 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trmt6Q8CE96 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms