Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Lysmd4Q8CC84 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.86■■□□□ 1.09
Lysmd4Q8CC84 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd4Q8CC84 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd4Q8CC84 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lysmd4Q8CC84 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd4Q8CC84 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd4Q8CC84 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd4Q8CC84 Gm8109-201ENSMUST00000194076 746 ntBASIC21.83■■□□□ 1.09
Lysmd4Q8CC84 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Lysmd4Q8CC84 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lysmd4Q8CC84 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Lysmd4Q8CC84 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd4Q8CC84 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.8■■□□□ 1.08
Lysmd4Q8CC84 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lysmd4Q8CC84 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd4Q8CC84 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd4Q8CC84 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd4Q8CC84 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd4Q8CC84 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.79■■□□□ 1.08
Lysmd4Q8CC84 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lysmd4Q8CC84 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Lysmd4Q8CC84 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lysmd4Q8CC84 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd4Q8CC84 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Lysmd4Q8CC84 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd4Q8CC84 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd4Q8CC84 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lysmd4Q8CC84 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lysmd4Q8CC84 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Lysmd4Q8CC84 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd4Q8CC84 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd4Q8CC84 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd4Q8CC84 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd4Q8CC84 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Lysmd4Q8CC84 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd4Q8CC84 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd4Q8CC84 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd4Q8CC84 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Lysmd4Q8CC84 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd4Q8CC84 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd4Q8CC84 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd4Q8CC84 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd4Q8CC84 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Lysmd4Q8CC84 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd4Q8CC84 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd4Q8CC84 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd4Q8CC84 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.65■■□□□ 1.06
Lysmd4Q8CC84 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Lysmd4Q8CC84 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Lysmd4Q8CC84 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd4Q8CC84 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd4Q8CC84 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd4Q8CC84 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd4Q8CC84 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd4Q8CC84 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd4Q8CC84 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd4Q8CC84 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd4Q8CC84 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd4Q8CC84 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd4Q8CC84 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd4Q8CC84 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd4Q8CC84 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd4Q8CC84 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.6■■□□□ 1.05
Lysmd4Q8CC84 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd4Q8CC84 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd4Q8CC84 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd4Q8CC84 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd4Q8CC84 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd4Q8CC84 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.58■■□□□ 1.04
Lysmd4Q8CC84 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.57■■□□□ 1.04
Lysmd4Q8CC84 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd4Q8CC84 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd4Q8CC84 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd4Q8CC84 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd4Q8CC84 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd4Q8CC84 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd4Q8CC84 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd4Q8CC84 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd4Q8CC84 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd4Q8CC84 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd4Q8CC84 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lysmd4Q8CC84 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lysmd4Q8CC84 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lysmd4Q8CC84 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd4Q8CC84 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd4Q8CC84 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd4Q8CC84 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lysmd4Q8CC84 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.52■■□□□ 1.04
Lysmd4Q8CC84 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Lysmd4Q8CC84 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.52■■□□□ 1.03
Lysmd4Q8CC84 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd4Q8CC84 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd4Q8CC84 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd4Q8CC84 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd4Q8CC84 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.5■■□□□ 1.03
Lysmd4Q8CC84 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd4Q8CC84 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lysmd4Q8CC84 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Lysmd4Q8CC84 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms