Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2,23
Shisa4Q8CA71 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28,99■■■□□ 2,23
Shisa4Q8CA71 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28,99■■■□□ 2,23
Shisa4Q8CA71 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28,99■■■□□ 2,23
Shisa4Q8CA71 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Shisa4Q8CA71 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Shisa4Q8CA71 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28,98■■■□□ 2,23
Shisa4Q8CA71 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28,98■■■□□ 2,23
Shisa4Q8CA71 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28,98■■■□□ 2,23
Shisa4Q8CA71 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28,98■■■□□ 2,23
Shisa4Q8CA71 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28,98■■■□□ 2,23
Shisa4Q8CA71 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28,98■■■□□ 2,23
Shisa4Q8CA71 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Shisa4Q8CA71 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28,97■■■□□ 2,23
Shisa4Q8CA71 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28,97■■■□□ 2,23
Shisa4Q8CA71 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28,96■■■□□ 2,23
Shisa4Q8CA71 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28,96■■■□□ 2,23
Shisa4Q8CA71 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28,96■■■□□ 2,23
Shisa4Q8CA71 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28,95■■■□□ 2,22
Shisa4Q8CA71 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28,95■■■□□ 2,22
Shisa4Q8CA71 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28,94■■■□□ 2,22
Shisa4Q8CA71 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Shisa4Q8CA71 Amer2-203ENSMUST00000225247 2662 ntBASIC28,93■■■□□ 2,22
Shisa4Q8CA71 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Shisa4Q8CA71 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Shisa4Q8CA71 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28,92■■■□□ 2,22
Shisa4Q8CA71 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28,9■■■□□ 2,22
Shisa4Q8CA71 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28,9■■■□□ 2,22
Shisa4Q8CA71 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28,89■■■□□ 2,22
Shisa4Q8CA71 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28,87■■■□□ 2,21
Shisa4Q8CA71 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28,87■■■□□ 2,21
Shisa4Q8CA71 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28,87■■■□□ 2,21
Shisa4Q8CA71 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28,86■■■□□ 2,21
Shisa4Q8CA71 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28,86■■■□□ 2,21
Shisa4Q8CA71 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28,86■■■□□ 2,21
Shisa4Q8CA71 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Shisa4Q8CA71 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Shisa4Q8CA71 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28,84■■■□□ 2,21
Shisa4Q8CA71 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28,84■■■□□ 2,21
Shisa4Q8CA71 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28,83■■■□□ 2,21
Shisa4Q8CA71 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28,83■■■□□ 2,21
Shisa4Q8CA71 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Shisa4Q8CA71 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28,81■■■□□ 2,2
Shisa4Q8CA71 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Shisa4Q8CA71 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28,8■■■□□ 2,2
Shisa4Q8CA71 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28,8■■■□□ 2,2
Shisa4Q8CA71 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28,78■■■□□ 2,2
Shisa4Q8CA71 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28,77■■■□□ 2,2
Shisa4Q8CA71 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
Shisa4Q8CA71 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28,77■■■□□ 2,2
Shisa4Q8CA71 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
Shisa4Q8CA71 Pcf11-205ENSMUST00000208255 1720 ntBASIC28,77■■■□□ 2,2
Shisa4Q8CA71 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Shisa4Q8CA71 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Shisa4Q8CA71 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28,74■■■□□ 2,19
Shisa4Q8CA71 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Shisa4Q8CA71 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28,72■■■□□ 2,19
Shisa4Q8CA71 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,72■■■□□ 2,19
Shisa4Q8CA71 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28,71■■■□□ 2,19
Shisa4Q8CA71 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28,7■■■□□ 2,19
Shisa4Q8CA71 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,18
Shisa4Q8CA71 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28,69■■■□□ 2,18
Shisa4Q8CA71 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28,68■■■□□ 2,18
Shisa4Q8CA71 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28,67■■■□□ 2,18
Shisa4Q8CA71 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28,67■■■□□ 2,18
Shisa4Q8CA71 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28,66■■■□□ 2,18
Shisa4Q8CA71 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28,66■■■□□ 2,18
Shisa4Q8CA71 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28,65■■■□□ 2,18
Shisa4Q8CA71 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Shisa4Q8CA71 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28,64■■■□□ 2,18
Shisa4Q8CA71 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28,64■■■□□ 2,18
Shisa4Q8CA71 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28,64■■■□□ 2,17
Shisa4Q8CA71 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Shisa4Q8CA71 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28,62■■■□□ 2,17
Shisa4Q8CA71 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Shisa4Q8CA71 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Shisa4Q8CA71 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28,6■■■□□ 2,17
Shisa4Q8CA71 Gm42809-201ENSMUST00000198429 1138 ntBASIC28,6■■■□□ 2,17
Shisa4Q8CA71 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
Shisa4Q8CA71 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28,59■■■□□ 2,17
Shisa4Q8CA71 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
Shisa4Q8CA71 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28,58■■■□□ 2,17
Shisa4Q8CA71 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
Shisa4Q8CA71 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28,57■■■□□ 2,16
Shisa4Q8CA71 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28,57■■■□□ 2,16
Shisa4Q8CA71 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
Shisa4Q8CA71 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28,54■■■□□ 2,16
Shisa4Q8CA71 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28,53■■■□□ 2,16
Shisa4Q8CA71 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Shisa4Q8CA71 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28,53■■■□□ 2,16
Shisa4Q8CA71 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Shisa4Q8CA71 Gm9939-201ENSMUST00000067161 1154 ntBASIC28,52■■■□□ 2,16
Shisa4Q8CA71 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28,51■■■□□ 2,15
Shisa4Q8CA71 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28,51■■■□□ 2,15
Shisa4Q8CA71 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
Shisa4Q8CA71 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28,49■■■□□ 2,15
Shisa4Q8CA71 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28,48■■■□□ 2,15
Shisa4Q8CA71 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Shisa4Q8CA71 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28,47■■■□□ 2,15
Shisa4Q8CA71 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms