Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Trim47Q8C0E3 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.31■■□□□ 1.96
Trim47Q8C0E3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.28■■□□□ 1.96
Trim47Q8C0E3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Trim47Q8C0E3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Trim47Q8C0E3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Trim47Q8C0E3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Trim47Q8C0E3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
Trim47Q8C0E3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Trim47Q8C0E3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Trim47Q8C0E3 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.25■■□□□ 1.95
Trim47Q8C0E3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trim47Q8C0E3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
Trim47Q8C0E3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.25■■□□□ 1.95
Trim47Q8C0E3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Trim47Q8C0E3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim47Q8C0E3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim47Q8C0E3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Trim47Q8C0E3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim47Q8C0E3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Trim47Q8C0E3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Trim47Q8C0E3 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.22■■□□□ 1.95
Trim47Q8C0E3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.22■■□□□ 1.95
Trim47Q8C0E3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Trim47Q8C0E3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim47Q8C0E3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim47Q8C0E3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trim47Q8C0E3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trim47Q8C0E3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Trim47Q8C0E3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Trim47Q8C0E3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trim47Q8C0E3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trim47Q8C0E3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Trim47Q8C0E3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.17■■□□□ 1.94
Trim47Q8C0E3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trim47Q8C0E3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trim47Q8C0E3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim47Q8C0E3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim47Q8C0E3 Gm6821-201ENSMUST00000107540 542 ntBASIC27.15■■□□□ 1.94
Trim47Q8C0E3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim47Q8C0E3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Trim47Q8C0E3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim47Q8C0E3 Gm8503-201ENSMUST00000118131 455 ntBASIC27.12■■□□□ 1.93
Trim47Q8C0E3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.12■■□□□ 1.93
Trim47Q8C0E3 Nkain2-201ENSMUST00000092602 558 ntBASIC27.12■■□□□ 1.93
Trim47Q8C0E3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trim47Q8C0E3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trim47Q8C0E3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trim47Q8C0E3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Trim47Q8C0E3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trim47Q8C0E3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Trim47Q8C0E3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim47Q8C0E3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim47Q8C0E3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Trim47Q8C0E3 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.09■■□□□ 1.93
Trim47Q8C0E3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.09■■□□□ 1.93
Trim47Q8C0E3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Trim47Q8C0E3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Trim47Q8C0E3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
Trim47Q8C0E3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Trim47Q8C0E3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.06■■□□□ 1.92
Trim47Q8C0E3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim47Q8C0E3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.05■■□□□ 1.92
Trim47Q8C0E3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim47Q8C0E3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Trim47Q8C0E3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Trim47Q8C0E3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Trim47Q8C0E3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim47Q8C0E3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.03■■□□□ 1.92
Trim47Q8C0E3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Trim47Q8C0E3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Trim47Q8C0E3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Trim47Q8C0E3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Trim47Q8C0E3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.02■■□□□ 1.92
Trim47Q8C0E3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Trim47Q8C0E3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Trim47Q8C0E3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Trim47Q8C0E3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27■■□□□ 1.91
Trim47Q8C0E3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27■■□□□ 1.91
Trim47Q8C0E3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27■■□□□ 1.91
Trim47Q8C0E3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trim47Q8C0E3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.99■■□□□ 1.91
Trim47Q8C0E3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.98■■□□□ 1.91
Trim47Q8C0E3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Trim47Q8C0E3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Trim47Q8C0E3 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.97■■□□□ 1.91
Trim47Q8C0E3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.95■■□□□ 1.9
Trim47Q8C0E3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Trim47Q8C0E3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim47Q8C0E3 Amer2-203ENSMUST00000225247 2662 ntBASIC26.94■■□□□ 1.9
Trim47Q8C0E3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.92■■□□□ 1.9
Trim47Q8C0E3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim47Q8C0E3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.91■■□□□ 1.9
Trim47Q8C0E3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim47Q8C0E3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.9■■□□□ 1.9
Trim47Q8C0E3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Trim47Q8C0E3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Trim47Q8C0E3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.88■■□□□ 1.89
Trim47Q8C0E3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim47Q8C0E3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.86■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms