Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrtm1Q8BXQ3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrtm1Q8BXQ3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lrtm1Q8BXQ3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrtm1Q8BXQ3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrtm1Q8BXQ3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrtm1Q8BXQ3 Amer2-203ENSMUST00000225247 2662 ntBASIC21.41■■□□□ 1.02
Lrtm1Q8BXQ3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrtm1Q8BXQ3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Lrtm1Q8BXQ3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.4■■□□□ 1.02
Lrtm1Q8BXQ3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrtm1Q8BXQ3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrtm1Q8BXQ3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.39■■□□□ 1.01
Lrtm1Q8BXQ3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrtm1Q8BXQ3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrtm1Q8BXQ3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrtm1Q8BXQ3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrtm1Q8BXQ3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Lrtm1Q8BXQ3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lrtm1Q8BXQ3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lrtm1Q8BXQ3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Lrtm1Q8BXQ3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrtm1Q8BXQ3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.35■■□□□ 1.01
Lrtm1Q8BXQ3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lrtm1Q8BXQ3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrtm1Q8BXQ3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrtm1Q8BXQ3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.34■■□□□ 1.01
Lrtm1Q8BXQ3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lrtm1Q8BXQ3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lrtm1Q8BXQ3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Lrtm1Q8BXQ3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrtm1Q8BXQ3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrtm1Q8BXQ3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lrtm1Q8BXQ3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Lrtm1Q8BXQ3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrtm1Q8BXQ3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrtm1Q8BXQ3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrtm1Q8BXQ3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lrtm1Q8BXQ3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Lrtm1Q8BXQ3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrtm1Q8BXQ3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Lrtm1Q8BXQ3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.28■■□□□ 1
Lrtm1Q8BXQ3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.28■■□□□ 1
Lrtm1Q8BXQ3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrtm1Q8BXQ3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrtm1Q8BXQ3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrtm1Q8BXQ3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrtm1Q8BXQ3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrtm1Q8BXQ3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrtm1Q8BXQ3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.24■□□□□ 0.99
Lrtm1Q8BXQ3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lrtm1Q8BXQ3 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.24■□□□□ 0.99
Lrtm1Q8BXQ3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrtm1Q8BXQ3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Lrtm1Q8BXQ3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrtm1Q8BXQ3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Lrtm1Q8BXQ3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrtm1Q8BXQ3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Lrtm1Q8BXQ3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrtm1Q8BXQ3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrtm1Q8BXQ3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.19■□□□□ 0.98
Lrtm1Q8BXQ3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrtm1Q8BXQ3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lrtm1Q8BXQ3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrtm1Q8BXQ3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrtm1Q8BXQ3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Lrtm1Q8BXQ3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Lrtm1Q8BXQ3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrtm1Q8BXQ3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Lrtm1Q8BXQ3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lrtm1Q8BXQ3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrtm1Q8BXQ3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrtm1Q8BXQ3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lrtm1Q8BXQ3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrtm1Q8BXQ3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Lrtm1Q8BXQ3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrtm1Q8BXQ3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrtm1Q8BXQ3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrtm1Q8BXQ3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.11■□□□□ 0.97
Lrtm1Q8BXQ3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrtm1Q8BXQ3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lrtm1Q8BXQ3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrtm1Q8BXQ3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.1■□□□□ 0.97
Lrtm1Q8BXQ3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrtm1Q8BXQ3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lrtm1Q8BXQ3 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.08■□□□□ 0.97
Lrtm1Q8BXQ3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrtm1Q8BXQ3 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.06■□□□□ 0.96
Lrtm1Q8BXQ3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrtm1Q8BXQ3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrtm1Q8BXQ3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrtm1Q8BXQ3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lrtm1Q8BXQ3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lrtm1Q8BXQ3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lrtm1Q8BXQ3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lrtm1Q8BXQ3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.01■□□□□ 0.95
Lrtm1Q8BXQ3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.01■□□□□ 0.95
Lrtm1Q8BXQ3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.01■□□□□ 0.95
Lrtm1Q8BXQ3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrtm1Q8BXQ3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms