Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cpne4Q8BLR2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cpne4Q8BLR2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cpne4Q8BLR2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cpne4Q8BLR2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cpne4Q8BLR2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpne4Q8BLR2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Cpne4Q8BLR2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.73■■□□□ 1.07
Cpne4Q8BLR2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpne4Q8BLR2 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.72■■□□□ 1.07
Cpne4Q8BLR2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.72■■□□□ 1.07
Cpne4Q8BLR2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpne4Q8BLR2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpne4Q8BLR2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpne4Q8BLR2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpne4Q8BLR2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Cpne4Q8BLR2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cpne4Q8BLR2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cpne4Q8BLR2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cpne4Q8BLR2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cpne4Q8BLR2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cpne4Q8BLR2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpne4Q8BLR2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpne4Q8BLR2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cpne4Q8BLR2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne4Q8BLR2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne4Q8BLR2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne4Q8BLR2 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.66■■□□□ 1.06
Cpne4Q8BLR2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpne4Q8BLR2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpne4Q8BLR2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpne4Q8BLR2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpne4Q8BLR2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Cpne4Q8BLR2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpne4Q8BLR2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cpne4Q8BLR2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.64■■□□□ 1.06
Cpne4Q8BLR2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpne4Q8BLR2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpne4Q8BLR2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpne4Q8BLR2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cpne4Q8BLR2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cpne4Q8BLR2 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.63■■□□□ 1.05
Cpne4Q8BLR2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cpne4Q8BLR2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpne4Q8BLR2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpne4Q8BLR2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpne4Q8BLR2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cpne4Q8BLR2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpne4Q8BLR2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cpne4Q8BLR2 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.58■■□□□ 1.05
Cpne4Q8BLR2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpne4Q8BLR2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpne4Q8BLR2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpne4Q8BLR2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpne4Q8BLR2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cpne4Q8BLR2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpne4Q8BLR2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpne4Q8BLR2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.55■■□□□ 1.04
Cpne4Q8BLR2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpne4Q8BLR2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cpne4Q8BLR2 Gm6821-201ENSMUST00000107540 542 ntBASIC21.54■■□□□ 1.04
Cpne4Q8BLR2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cpne4Q8BLR2 Nkain2-201ENSMUST00000092602 558 ntBASIC21.54■■□□□ 1.04
Cpne4Q8BLR2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cpne4Q8BLR2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cpne4Q8BLR2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.53■■□□□ 1.04
Cpne4Q8BLR2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpne4Q8BLR2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpne4Q8BLR2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpne4Q8BLR2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpne4Q8BLR2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cpne4Q8BLR2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpne4Q8BLR2 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.51■■□□□ 1.03
Cpne4Q8BLR2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Cpne4Q8BLR2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Cpne4Q8BLR2 Gm8503-201ENSMUST00000118131 455 ntBASIC21.49■■□□□ 1.03
Cpne4Q8BLR2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cpne4Q8BLR2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cpne4Q8BLR2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cpne4Q8BLR2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.46■■□□□ 1.03
Cpne4Q8BLR2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cpne4Q8BLR2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cpne4Q8BLR2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cpne4Q8BLR2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cpne4Q8BLR2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cpne4Q8BLR2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpne4Q8BLR2 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.44■■□□□ 1.02
Cpne4Q8BLR2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.44■■□□□ 1.02
Cpne4Q8BLR2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpne4Q8BLR2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cpne4Q8BLR2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms