Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc5a7Q8BGY9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Slc5a7Q8BGY9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc5a7Q8BGY9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc5a7Q8BGY9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc5a7Q8BGY9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc5a7Q8BGY9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc5a7Q8BGY9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc5a7Q8BGY9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc5a7Q8BGY9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Slc5a7Q8BGY9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.2■□□□□ 0.98
Slc5a7Q8BGY9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc5a7Q8BGY9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc5a7Q8BGY9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.18■□□□□ 0.98
Slc5a7Q8BGY9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc5a7Q8BGY9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc5a7Q8BGY9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc5a7Q8BGY9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc5a7Q8BGY9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc5a7Q8BGY9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc5a7Q8BGY9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc5a7Q8BGY9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc5a7Q8BGY9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slc5a7Q8BGY9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slc5a7Q8BGY9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Slc5a7Q8BGY9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc5a7Q8BGY9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc5a7Q8BGY9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc5a7Q8BGY9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc5a7Q8BGY9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Slc5a7Q8BGY9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Slc5a7Q8BGY9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc5a7Q8BGY9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc5a7Q8BGY9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc5a7Q8BGY9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc5a7Q8BGY9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Slc5a7Q8BGY9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc5a7Q8BGY9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc5a7Q8BGY9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc5a7Q8BGY9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Slc5a7Q8BGY9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc5a7Q8BGY9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc5a7Q8BGY9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc5a7Q8BGY9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc5a7Q8BGY9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc5a7Q8BGY9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc5a7Q8BGY9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc5a7Q8BGY9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc5a7Q8BGY9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc5a7Q8BGY9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc5a7Q8BGY9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc5a7Q8BGY9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc5a7Q8BGY9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Slc5a7Q8BGY9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc5a7Q8BGY9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Slc5a7Q8BGY9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc5a7Q8BGY9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc5a7Q8BGY9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc5a7Q8BGY9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc5a7Q8BGY9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Slc5a7Q8BGY9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc5a7Q8BGY9 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.01■□□□□ 0.95
Slc5a7Q8BGY9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc5a7Q8BGY9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc5a7Q8BGY9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.01■□□□□ 0.95
Slc5a7Q8BGY9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Slc5a7Q8BGY9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.01■□□□□ 0.95
Slc5a7Q8BGY9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc5a7Q8BGY9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Slc5a7Q8BGY9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Slc5a7Q8BGY9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc5a7Q8BGY9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21■□□□□ 0.95
Slc5a7Q8BGY9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.99■□□□□ 0.95
Slc5a7Q8BGY9 Gm27322-201ENSMUST00000184007 104 ntBASIC20.99■□□□□ 0.95
Slc5a7Q8BGY9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc5a7Q8BGY9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc5a7Q8BGY9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Slc5a7Q8BGY9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc5a7Q8BGY9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc5a7Q8BGY9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc5a7Q8BGY9 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.96■□□□□ 0.95
Slc5a7Q8BGY9 Gm25262-201ENSMUST00000174934 133 ntBASIC20.96■□□□□ 0.95
Slc5a7Q8BGY9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc5a7Q8BGY9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc5a7Q8BGY9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Slc5a7Q8BGY9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc5a7Q8BGY9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Slc5a7Q8BGY9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc5a7Q8BGY9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc5a7Q8BGY9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc5a7Q8BGY9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc5a7Q8BGY9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc5a7Q8BGY9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc5a7Q8BGY9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc5a7Q8BGY9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc5a7Q8BGY9 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.91■□□□□ 0.94
Slc5a7Q8BGY9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.91■□□□□ 0.94
Slc5a7Q8BGY9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc5a7Q8BGY9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc5a7Q8BGY9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms