Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim23Q8BGX0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim23Q8BGX0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.65■■□□□ 1.38
Trim23Q8BGX0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim23Q8BGX0 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.63■■□□□ 1.37
Trim23Q8BGX0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim23Q8BGX0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim23Q8BGX0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trim23Q8BGX0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim23Q8BGX0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim23Q8BGX0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim23Q8BGX0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trim23Q8BGX0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim23Q8BGX0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim23Q8BGX0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim23Q8BGX0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.6■■□□□ 1.37
Trim23Q8BGX0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim23Q8BGX0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trim23Q8BGX0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.59■■□□□ 1.37
Trim23Q8BGX0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Trim23Q8BGX0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Trim23Q8BGX0 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.58■■□□□ 1.36
Trim23Q8BGX0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim23Q8BGX0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trim23Q8BGX0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
Trim23Q8BGX0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Trim23Q8BGX0 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.56■■□□□ 1.36
Trim23Q8BGX0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.56■■□□□ 1.36
Trim23Q8BGX0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim23Q8BGX0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim23Q8BGX0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trim23Q8BGX0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim23Q8BGX0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim23Q8BGX0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim23Q8BGX0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim23Q8BGX0 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.52■■□□□ 1.36
Trim23Q8BGX0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Trim23Q8BGX0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim23Q8BGX0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim23Q8BGX0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim23Q8BGX0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Trim23Q8BGX0 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.5■■□□□ 1.35
Trim23Q8BGX0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim23Q8BGX0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim23Q8BGX0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim23Q8BGX0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trim23Q8BGX0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim23Q8BGX0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim23Q8BGX0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.47■■□□□ 1.35
Trim23Q8BGX0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Trim23Q8BGX0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
Trim23Q8BGX0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim23Q8BGX0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim23Q8BGX0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim23Q8BGX0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Trim23Q8BGX0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trim23Q8BGX0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim23Q8BGX0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Trim23Q8BGX0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Trim23Q8BGX0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim23Q8BGX0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Trim23Q8BGX0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim23Q8BGX0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Trim23Q8BGX0 Nkain2-201ENSMUST00000092602 558 ntBASIC23.43■■□□□ 1.34
Trim23Q8BGX0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim23Q8BGX0 Gm8503-201ENSMUST00000118131 455 ntBASIC23.42■■□□□ 1.34
Trim23Q8BGX0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Trim23Q8BGX0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim23Q8BGX0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Trim23Q8BGX0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim23Q8BGX0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim23Q8BGX0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Trim23Q8BGX0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim23Q8BGX0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.4■■□□□ 1.34
Trim23Q8BGX0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.4■■□□□ 1.34
Trim23Q8BGX0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim23Q8BGX0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
Trim23Q8BGX0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim23Q8BGX0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.38■■□□□ 1.33
Trim23Q8BGX0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Trim23Q8BGX0 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.38■■□□□ 1.33
Trim23Q8BGX0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trim23Q8BGX0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.37■■□□□ 1.33
Trim23Q8BGX0 Gm6821-201ENSMUST00000107540 542 ntBASIC23.36■■□□□ 1.33
Trim23Q8BGX0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim23Q8BGX0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
Trim23Q8BGX0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim23Q8BGX0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.31■■□□□ 1.32
Trim23Q8BGX0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim23Q8BGX0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Trim23Q8BGX0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.29■■□□□ 1.32
Trim23Q8BGX0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
Trim23Q8BGX0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.28■■□□□ 1.32
Trim23Q8BGX0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim23Q8BGX0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim23Q8BGX0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
Trim23Q8BGX0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.26■■□□□ 1.31
Trim23Q8BGX0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim23Q8BGX0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim23Q8BGX0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms