Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sim1Q61045 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sim1Q61045 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Sim1Q61045 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Sim1Q61045 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Sim1Q61045 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.16■■□□□ 1.46
Sim1Q61045 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sim1Q61045 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.15■■□□□ 1.46
Sim1Q61045 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Sim1Q61045 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Sim1Q61045 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Sim1Q61045 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Sim1Q61045 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Sim1Q61045 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sim1Q61045 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sim1Q61045 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Sim1Q61045 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sim1Q61045 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sim1Q61045 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.12■■□□□ 1.45
Sim1Q61045 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Sim1Q61045 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.11■■□□□ 1.45
Sim1Q61045 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Sim1Q61045 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Sim1Q61045 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.11■■□□□ 1.45
Sim1Q61045 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Sim1Q61045 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.1■■□□□ 1.45
Sim1Q61045 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.1■■□□□ 1.45
Sim1Q61045 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sim1Q61045 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sim1Q61045 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Sim1Q61045 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sim1Q61045 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Sim1Q61045 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Sim1Q61045 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sim1Q61045 Gm11599-201ENSMUST00000118720 878 ntBASIC24.07■■□□□ 1.44
Sim1Q61045 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sim1Q61045 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.06■■□□□ 1.44
Sim1Q61045 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Sim1Q61045 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Sim1Q61045 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
Sim1Q61045 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.04■■□□□ 1.44
Sim1Q61045 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Sim1Q61045 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sim1Q61045 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Sim1Q61045 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.03■■□□□ 1.44
Sim1Q61045 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sim1Q61045 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.02■■□□□ 1.44
Sim1Q61045 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Sim1Q61045 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Sim1Q61045 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Sim1Q61045 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sim1Q61045 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24■■□□□ 1.43
Sim1Q61045 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24■■□□□ 1.43
Sim1Q61045 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.99■■□□□ 1.43
Sim1Q61045 Mir6538-201ENSMUST00000183713 110 ntBASIC23.99■■□□□ 1.43
Sim1Q61045 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sim1Q61045 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sim1Q61045 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sim1Q61045 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Sim1Q61045 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Sim1Q61045 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
Sim1Q61045 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.96■■□□□ 1.43
Sim1Q61045 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Sim1Q61045 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Sim1Q61045 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sim1Q61045 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.94■■□□□ 1.42
Sim1Q61045 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sim1Q61045 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Sim1Q61045 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Sim1Q61045 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sim1Q61045 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.94■■□□□ 1.42
Sim1Q61045 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sim1Q61045 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sim1Q61045 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sim1Q61045 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sim1Q61045 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Sim1Q61045 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Sim1Q61045 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sim1Q61045 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.9■■□□□ 1.42
Sim1Q61045 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
Sim1Q61045 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sim1Q61045 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Sim1Q61045 Gm11175-201ENSMUST00000116172 543 ntBASIC23.89■■□□□ 1.41
Sim1Q61045 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sim1Q61045 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sim1Q61045 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sim1Q61045 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sim1Q61045 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Sim1Q61045 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
Sim1Q61045 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Sim1Q61045 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Sim1Q61045 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.84■■□□□ 1.41
Sim1Q61045 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sim1Q61045 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Sim1Q61045 Cap2-205ENSMUST00000225824 1634 ntBASIC23.83■■□□□ 1.41
Sim1Q61045 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sim1Q61045 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sim1Q61045 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sim1Q61045 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sim1Q61045 Amer2-203ENSMUST00000225247 2662 ntBASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms