Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm6821-201ENSMUST00000107540 542 ntBASIC20.59■□□□□ 0.89
Trav6d-4Q5R1I0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.59■□□□□ 0.89
Trav6d-4Q5R1I0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav6d-4Q5R1I0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav6d-4Q5R1I0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Trav6d-4Q5R1I0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav6d-4Q5R1I0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trav6d-4Q5R1I0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav6d-4Q5R1I0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav6d-4Q5R1I0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.56■□□□□ 0.88
Trav6d-4Q5R1I0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.56■□□□□ 0.88
Trav6d-4Q5R1I0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav6d-4Q5R1I0 Gm8503-201ENSMUST00000118131 455 ntBASIC20.54■□□□□ 0.88
Trav6d-4Q5R1I0 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.54■□□□□ 0.88
Trav6d-4Q5R1I0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav6d-4Q5R1I0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav6d-4Q5R1I0 Nkain2-201ENSMUST00000092602 558 ntBASIC20.53■□□□□ 0.88
Trav6d-4Q5R1I0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.53■□□□□ 0.88
Trav6d-4Q5R1I0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6d-4Q5R1I0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6d-4Q5R1I0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6d-4Q5R1I0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6d-4Q5R1I0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav6d-4Q5R1I0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav6d-4Q5R1I0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav6d-4Q5R1I0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav6d-4Q5R1I0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav6d-4Q5R1I0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trav6d-4Q5R1I0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trav6d-4Q5R1I0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6d-4Q5R1I0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.49■□□□□ 0.87
Trav6d-4Q5R1I0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6d-4Q5R1I0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6d-4Q5R1I0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6d-4Q5R1I0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6d-4Q5R1I0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trav6d-4Q5R1I0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trav6d-4Q5R1I0 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.47■□□□□ 0.87
Trav6d-4Q5R1I0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.47■□□□□ 0.87
Trav6d-4Q5R1I0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.47■□□□□ 0.87
Trav6d-4Q5R1I0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Trav6d-4Q5R1I0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Trav6d-4Q5R1I0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6d-4Q5R1I0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6d-4Q5R1I0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trav6d-4Q5R1I0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6d-4Q5R1I0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6d-4Q5R1I0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav6d-4Q5R1I0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav6d-4Q5R1I0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6d-4Q5R1I0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6d-4Q5R1I0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6d-4Q5R1I0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6d-4Q5R1I0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trav6d-4Q5R1I0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trav6d-4Q5R1I0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6d-4Q5R1I0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6d-4Q5R1I0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6d-4Q5R1I0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6d-4Q5R1I0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6d-4Q5R1I0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6d-4Q5R1I0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav6d-4Q5R1I0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trav6d-4Q5R1I0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav6d-4Q5R1I0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav6d-4Q5R1I0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav6d-4Q5R1I0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
Trav6d-4Q5R1I0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav6d-4Q5R1I0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav6d-4Q5R1I0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6d-4Q5R1I0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6d-4Q5R1I0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6d-4Q5R1I0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.38■□□□□ 0.85
Trav6d-4Q5R1I0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6d-4Q5R1I0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trav6d-4Q5R1I0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.37■□□□□ 0.85
Trav6d-4Q5R1I0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.37■□□□□ 0.85
Trav6d-4Q5R1I0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.36■□□□□ 0.85
Trav6d-4Q5R1I0 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.36■□□□□ 0.85
Trav6d-4Q5R1I0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6d-4Q5R1I0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6d-4Q5R1I0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6d-4Q5R1I0 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.34■□□□□ 0.85
Trav6d-4Q5R1I0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav6d-4Q5R1I0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav6d-4Q5R1I0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.32■□□□□ 0.84
Trav6d-4Q5R1I0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6d-4Q5R1I0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav6d-4Q5R1I0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6d-4Q5R1I0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trav6d-4Q5R1I0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6d-4Q5R1I0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6d-4Q5R1I0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.31■□□□□ 0.84
Trav6d-4Q5R1I0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6d-4Q5R1I0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.31■□□□□ 0.84
Trav6d-4Q5R1I0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6d-4Q5R1I0 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.3■□□□□ 0.84
Trav6d-4Q5R1I0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6d-4Q5R1I0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav6d-4Q5R1I0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms