Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smim6Q3U0I6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smim6Q3U0I6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Smim6Q3U0I6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smim6Q3U0I6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smim6Q3U0I6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim6Q3U0I6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim6Q3U0I6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim6Q3U0I6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Smim6Q3U0I6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smim6Q3U0I6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim6Q3U0I6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smim6Q3U0I6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smim6Q3U0I6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim6Q3U0I6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim6Q3U0I6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Smim6Q3U0I6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim6Q3U0I6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smim6Q3U0I6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Smim6Q3U0I6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smim6Q3U0I6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim6Q3U0I6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smim6Q3U0I6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smim6Q3U0I6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smim6Q3U0I6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smim6Q3U0I6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.82■□□□□ 0.6
Smim6Q3U0I6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smim6Q3U0I6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim6Q3U0I6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Smim6Q3U0I6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim6Q3U0I6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.8■□□□□ 0.6
Smim6Q3U0I6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smim6Q3U0I6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim6Q3U0I6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smim6Q3U0I6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim6Q3U0I6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smim6Q3U0I6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smim6Q3U0I6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim6Q3U0I6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim6Q3U0I6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim6Q3U0I6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim6Q3U0I6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim6Q3U0I6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.77■□□□□ 0.6
Smim6Q3U0I6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim6Q3U0I6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim6Q3U0I6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smim6Q3U0I6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smim6Q3U0I6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smim6Q3U0I6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim6Q3U0I6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim6Q3U0I6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim6Q3U0I6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim6Q3U0I6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smim6Q3U0I6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim6Q3U0I6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim6Q3U0I6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smim6Q3U0I6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim6Q3U0I6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim6Q3U0I6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim6Q3U0I6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim6Q3U0I6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim6Q3U0I6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim6Q3U0I6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim6Q3U0I6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.73■□□□□ 0.59
Smim6Q3U0I6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim6Q3U0I6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim6Q3U0I6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim6Q3U0I6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim6Q3U0I6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim6Q3U0I6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim6Q3U0I6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.71■□□□□ 0.59
Smim6Q3U0I6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smim6Q3U0I6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Smim6Q3U0I6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smim6Q3U0I6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Smim6Q3U0I6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim6Q3U0I6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim6Q3U0I6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim6Q3U0I6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim6Q3U0I6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim6Q3U0I6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim6Q3U0I6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim6Q3U0I6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim6Q3U0I6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim6Q3U0I6 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.68■□□□□ 0.58
Smim6Q3U0I6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim6Q3U0I6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim6Q3U0I6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim6Q3U0I6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.67■□□□□ 0.58
Smim6Q3U0I6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.66■□□□□ 0.58
Smim6Q3U0I6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim6Q3U0I6 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.66■□□□□ 0.58
Smim6Q3U0I6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smim6Q3U0I6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim6Q3U0I6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smim6Q3U0I6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smim6Q3U0I6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smim6Q3U0I6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim6Q3U0I6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim6Q3U0I6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms