Protein–RNA interactions for Protein: P43024

Cox6a1, Cytochrome c oxidase subunit 6A1, mitochondrial, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox6a1P43024 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cox6a1P43024 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.96■□□□□ 0.95
Cox6a1P43024 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Cox6a1P43024 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cox6a1P43024 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cox6a1P43024 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cox6a1P43024 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cox6a1P43024 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cox6a1P43024 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.92■□□□□ 0.94
Cox6a1P43024 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cox6a1P43024 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cox6a1P43024 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cox6a1P43024 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Cox6a1P43024 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cox6a1P43024 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cox6a1P43024 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.9■□□□□ 0.94
Cox6a1P43024 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.9■□□□□ 0.94
Cox6a1P43024 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Cox6a1P43024 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cox6a1P43024 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cox6a1P43024 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.89■□□□□ 0.93
Cox6a1P43024 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cox6a1P43024 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cox6a1P43024 Gm11599-201ENSMUST00000118720 878 ntBASIC20.87■□□□□ 0.93
Cox6a1P43024 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cox6a1P43024 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.85■□□□□ 0.93
Cox6a1P43024 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cox6a1P43024 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cox6a1P43024 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.85■□□□□ 0.93
Cox6a1P43024 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cox6a1P43024 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.84■□□□□ 0.93
Cox6a1P43024 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.84■□□□□ 0.93
Cox6a1P43024 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.83■□□□□ 0.93
Cox6a1P43024 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cox6a1P43024 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cox6a1P43024 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.83■□□□□ 0.93
Cox6a1P43024 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cox6a1P43024 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.81■□□□□ 0.92
Cox6a1P43024 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cox6a1P43024 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cox6a1P43024 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cox6a1P43024 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cox6a1P43024 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cox6a1P43024 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cox6a1P43024 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cox6a1P43024 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
Cox6a1P43024 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cox6a1P43024 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cox6a1P43024 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cox6a1P43024 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cox6a1P43024 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cox6a1P43024 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cox6a1P43024 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cox6a1P43024 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cox6a1P43024 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cox6a1P43024 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.72■□□□□ 0.91
Cox6a1P43024 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cox6a1P43024 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cox6a1P43024 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.72■□□□□ 0.91
Cox6a1P43024 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cox6a1P43024 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cox6a1P43024 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cox6a1P43024 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cox6a1P43024 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.7■□□□□ 0.9
Cox6a1P43024 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cox6a1P43024 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.7■□□□□ 0.9
Cox6a1P43024 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cox6a1P43024 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.69■□□□□ 0.9
Cox6a1P43024 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cox6a1P43024 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cox6a1P43024 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.69■□□□□ 0.9
Cox6a1P43024 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cox6a1P43024 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.67■□□□□ 0.9
Cox6a1P43024 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.67■□□□□ 0.9
Cox6a1P43024 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cox6a1P43024 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cox6a1P43024 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cox6a1P43024 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cox6a1P43024 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.65■□□□□ 0.9
Cox6a1P43024 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.65■□□□□ 0.9
Cox6a1P43024 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cox6a1P43024 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cox6a1P43024 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cox6a1P43024 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cox6a1P43024 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cox6a1P43024 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cox6a1P43024 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.63■□□□□ 0.89
Cox6a1P43024 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cox6a1P43024 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cox6a1P43024 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cox6a1P43024 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cox6a1P43024 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cox6a1P43024 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.61■□□□□ 0.89
Cox6a1P43024 Gm30023-201ENSMUST00000197970 889 ntBASIC20.6■□□□□ 0.89
Cox6a1P43024 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cox6a1P43024 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.59■□□□□ 0.89
Cox6a1P43024 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.59■□□□□ 0.89
Cox6a1P43024 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cox6a1P43024 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cox6a1P43024 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms