Protein–RNA interactions for Protein: P12656

Tshb, Thyrotropin subunit beta, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TshbP12656 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
TshbP12656 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TshbP12656 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TshbP12656 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TshbP12656 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.68■□□□□ 0.42
TshbP12656 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TshbP12656 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TshbP12656 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TshbP12656 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TshbP12656 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TshbP12656 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TshbP12656 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TshbP12656 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TshbP12656 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TshbP12656 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TshbP12656 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TshbP12656 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TshbP12656 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TshbP12656 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TshbP12656 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.65■□□□□ 0.42
TshbP12656 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.65■□□□□ 0.42
TshbP12656 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TshbP12656 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TshbP12656 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TshbP12656 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TshbP12656 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TshbP12656 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.63■□□□□ 0.41
TshbP12656 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TshbP12656 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TshbP12656 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TshbP12656 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.62■□□□□ 0.41
TshbP12656 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TshbP12656 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TshbP12656 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TshbP12656 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TshbP12656 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TshbP12656 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TshbP12656 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TshbP12656 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TshbP12656 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TshbP12656 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TshbP12656 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.59■□□□□ 0.41
TshbP12656 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TshbP12656 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TshbP12656 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.58■□□□□ 0.4
TshbP12656 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TshbP12656 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TshbP12656 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TshbP12656 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TshbP12656 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.56■□□□□ 0.4
TshbP12656 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TshbP12656 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TshbP12656 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TshbP12656 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TshbP12656 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TshbP12656 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TshbP12656 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TshbP12656 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TshbP12656 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TshbP12656 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TshbP12656 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TshbP12656 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TshbP12656 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TshbP12656 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TshbP12656 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TshbP12656 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.51■□□□□ 0.39
TshbP12656 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TshbP12656 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TshbP12656 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TshbP12656 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TshbP12656 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TshbP12656 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TshbP12656 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TshbP12656 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TshbP12656 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TshbP12656 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TshbP12656 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.48■□□□□ 0.39
TshbP12656 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TshbP12656 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TshbP12656 Gm24804-201ENSMUST00000174982 85 ntBASIC17.47■□□□□ 0.39
TshbP12656 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TshbP12656 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TshbP12656 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TshbP12656 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TshbP12656 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TshbP12656 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TshbP12656 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.44■□□□□ 0.38
TshbP12656 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TshbP12656 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.43■□□□□ 0.38
TshbP12656 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TshbP12656 Gm16148-201ENSMUST00000119653 893 ntBASIC17.43■□□□□ 0.38
TshbP12656 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TshbP12656 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TshbP12656 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TshbP12656 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TshbP12656 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TshbP12656 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TshbP12656 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TshbP12656 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TshbP12656 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms