Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Best1O88870 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Best1O88870 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23,87■■□□□ 1,41
Best1O88870 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23,87■■□□□ 1,41
Best1O88870 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23,86■■□□□ 1,41
Best1O88870 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Best1O88870 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23,85■■□□□ 1,41
Best1O88870 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23,85■■□□□ 1,41
Best1O88870 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23,84■■□□□ 1,41
Best1O88870 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23,84■■□□□ 1,41
Best1O88870 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23,83■■□□□ 1,41
Best1O88870 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23,83■■□□□ 1,41
Best1O88870 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23,82■■□□□ 1,4
Best1O88870 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23,82■■□□□ 1,4
Best1O88870 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23,82■■□□□ 1,4
Best1O88870 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23,82■■□□□ 1,4
Best1O88870 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23,81■■□□□ 1,4
Best1O88870 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
Best1O88870 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23,8■■□□□ 1,4
Best1O88870 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
Best1O88870 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23,79■■□□□ 1,4
Best1O88870 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23,79■■□□□ 1,4
Best1O88870 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23,78■■□□□ 1,4
Best1O88870 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23,77■■□□□ 1,4
Best1O88870 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23,77■■□□□ 1,4
Best1O88870 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23,77■■□□□ 1,4
Best1O88870 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23,77■■□□□ 1,4
Best1O88870 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23,76■■□□□ 1,39
Best1O88870 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23,75■■□□□ 1,39
Best1O88870 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Best1O88870 Zxda-201ENSMUST00000117281 2621 ntBASIC23,75■■□□□ 1,39
Best1O88870 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23,74■■□□□ 1,39
Best1O88870 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23,74■■□□□ 1,39
Best1O88870 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23,73■■□□□ 1,39
Best1O88870 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23,73■■□□□ 1,39
Best1O88870 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23,71■■□□□ 1,39
Best1O88870 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23,7■■□□□ 1,38
Best1O88870 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23,7■■□□□ 1,38
Best1O88870 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23,69■■□□□ 1,38
Best1O88870 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23,69■■□□□ 1,38
Best1O88870 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23,69■■□□□ 1,38
Best1O88870 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23,69■■□□□ 1,38
Best1O88870 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23,69■■□□□ 1,38
Best1O88870 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23,68■■□□□ 1,38
Best1O88870 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23,68■■□□□ 1,38
Best1O88870 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23,68■■□□□ 1,38
Best1O88870 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23,68■■□□□ 1,38
Best1O88870 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23,67■■□□□ 1,38
Best1O88870 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23,67■■□□□ 1,38
Best1O88870 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23,66■■□□□ 1,38
Best1O88870 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23,66■■□□□ 1,38
Best1O88870 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23,65■■□□□ 1,38
Best1O88870 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23,65■■□□□ 1,38
Best1O88870 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23,65■■□□□ 1,38
Best1O88870 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23,64■■□□□ 1,38
Best1O88870 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23,64■■□□□ 1,37
Best1O88870 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23,63■■□□□ 1,37
Best1O88870 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23,63■■□□□ 1,37
Best1O88870 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23,63■■□□□ 1,37
Best1O88870 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23,63■■□□□ 1,37
Best1O88870 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23,62■■□□□ 1,37
Best1O88870 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23,62■■□□□ 1,37
Best1O88870 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23,61■■□□□ 1,37
Best1O88870 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23,59■■□□□ 1,37
Best1O88870 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23,59■■□□□ 1,37
Best1O88870 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23,59■■□□□ 1,37
Best1O88870 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23,59■■□□□ 1,37
Best1O88870 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23,59■■□□□ 1,37
Best1O88870 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23,58■■□□□ 1,37
Best1O88870 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23,58■■□□□ 1,37
Best1O88870 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23,58■■□□□ 1,37
Best1O88870 Pcf11-205ENSMUST00000208255 1720 ntBASIC23,58■■□□□ 1,37
Best1O88870 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23,58■■□□□ 1,36
Best1O88870 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Best1O88870 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23,57■■□□□ 1,36
Best1O88870 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23,57■■□□□ 1,36
Best1O88870 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23,56■■□□□ 1,36
Best1O88870 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23,56■■□□□ 1,36
Best1O88870 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23,56■■□□□ 1,36
Best1O88870 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23,56■■□□□ 1,36
Best1O88870 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23,56■■□□□ 1,36
Best1O88870 Gm43445-201ENSMUST00000198564 2091 ntBASIC23,55■■□□□ 1,36
Best1O88870 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23,54■■□□□ 1,36
Best1O88870 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23,54■■□□□ 1,36
Best1O88870 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23,54■■□□□ 1,36
Best1O88870 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23,53■■□□□ 1,36
Best1O88870 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23,52■■□□□ 1,36
Best1O88870 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23,52■■□□□ 1,36
Best1O88870 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23,52■■□□□ 1,36
Best1O88870 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23,52■■□□□ 1,36
Best1O88870 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23,52■■□□□ 1,36
Best1O88870 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23,51■■□□□ 1,35
Best1O88870 Gm30023-201ENSMUST00000197970 889 ntBASIC23,51■■□□□ 1,35
Best1O88870 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23,51■■□□□ 1,35
Best1O88870 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23,49■■□□□ 1,35
Best1O88870 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23,49■■□□□ 1,35
Best1O88870 Gm7432-201ENSMUST00000210343 879 ntBASIC23,49■■□□□ 1,35
Best1O88870 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23,49■■□□□ 1,35
Best1O88870 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23,48■■□□□ 1,35
Best1O88870 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23,47■■□□□ 1,35
Retrieved 100 of 76,532 protein–RNA pairs in 12,9 ms