Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Dkk1O54908 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Dkk1O54908 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Dkk1O54908 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Dkk1O54908 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Dkk1O54908 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.07■□□□□ 0.96
Dkk1O54908 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Dkk1O54908 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Dkk1O54908 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Dkk1O54908 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Dkk1O54908 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Dkk1O54908 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Dkk1O54908 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Dkk1O54908 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dkk1O54908 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dkk1O54908 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.04■□□□□ 0.96
Dkk1O54908 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Dkk1O54908 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.02■□□□□ 0.96
Dkk1O54908 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dkk1O54908 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dkk1O54908 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dkk1O54908 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Dkk1O54908 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.01■□□□□ 0.95
Dkk1O54908 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Dkk1O54908 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21■□□□□ 0.95
Dkk1O54908 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Dkk1O54908 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Dkk1O54908 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.99■□□□□ 0.95
Dkk1O54908 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Dkk1O54908 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Dkk1O54908 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Dkk1O54908 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Dkk1O54908 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Dkk1O54908 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Dkk1O54908 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Dkk1O54908 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Dkk1O54908 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Dkk1O54908 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Dkk1O54908 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
Dkk1O54908 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Dkk1O54908 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Dkk1O54908 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.92■□□□□ 0.94
Dkk1O54908 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Dkk1O54908 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.91■□□□□ 0.94
Dkk1O54908 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dkk1O54908 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.91■□□□□ 0.94
Dkk1O54908 Amer2-203ENSMUST00000225247 2662 ntBASIC20.91■□□□□ 0.94
Dkk1O54908 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Dkk1O54908 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dkk1O54908 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dkk1O54908 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Dkk1O54908 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Dkk1O54908 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dkk1O54908 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Dkk1O54908 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dkk1O54908 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Dkk1O54908 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dkk1O54908 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Dkk1O54908 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dkk1O54908 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.87■□□□□ 0.93
Dkk1O54908 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dkk1O54908 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dkk1O54908 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dkk1O54908 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dkk1O54908 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Dkk1O54908 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dkk1O54908 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dkk1O54908 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Dkk1O54908 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dkk1O54908 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dkk1O54908 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Dkk1O54908 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.83■□□□□ 0.92
Dkk1O54908 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Dkk1O54908 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Dkk1O54908 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Dkk1O54908 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dkk1O54908 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dkk1O54908 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Dkk1O54908 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dkk1O54908 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Dkk1O54908 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.77■□□□□ 0.92
Dkk1O54908 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dkk1O54908 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Dkk1O54908 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dkk1O54908 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Dkk1O54908 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dkk1O54908 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Dkk1O54908 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dkk1O54908 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dkk1O54908 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dkk1O54908 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dkk1O54908 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.71■□□□□ 0.91
Dkk1O54908 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dkk1O54908 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.7■□□□□ 0.9
Dkk1O54908 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.7■□□□□ 0.9
Dkk1O54908 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Dkk1O54908 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.7■□□□□ 0.9
Dkk1O54908 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dkk1O54908 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dkk1O54908 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms