Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
Slc1a4O35874 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Slc1a4O35874 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Slc1a4O35874 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Slc1a4O35874 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.74■■■□□ 2.19
Slc1a4O35874 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Slc1a4O35874 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Slc1a4O35874 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.72■■■□□ 2.19
Slc1a4O35874 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Slc1a4O35874 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.71■■■□□ 2.19
Slc1a4O35874 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Slc1a4O35874 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Slc1a4O35874 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
Slc1a4O35874 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Slc1a4O35874 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Slc1a4O35874 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.67■■■□□ 2.18
Slc1a4O35874 Gm6821-201ENSMUST00000107540 542 ntBASIC28.66■■■□□ 2.18
Slc1a4O35874 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
Slc1a4O35874 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Slc1a4O35874 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Slc1a4O35874 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.64■■■□□ 2.18
Slc1a4O35874 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Slc1a4O35874 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
Slc1a4O35874 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.63■■■□□ 2.17
Slc1a4O35874 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.63■■■□□ 2.17
Slc1a4O35874 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Slc1a4O35874 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Slc1a4O35874 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.62■■■□□ 2.17
Slc1a4O35874 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.62■■■□□ 2.17
Slc1a4O35874 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Slc1a4O35874 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Slc1a4O35874 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Slc1a4O35874 Gm8503-201ENSMUST00000118131 455 ntBASIC28.6■■■□□ 2.17
Slc1a4O35874 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Slc1a4O35874 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Slc1a4O35874 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Slc1a4O35874 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Slc1a4O35874 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Slc1a4O35874 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Slc1a4O35874 Nkain2-201ENSMUST00000092602 558 ntBASIC28.58■■■□□ 2.17
Slc1a4O35874 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Slc1a4O35874 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Slc1a4O35874 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.56■■■□□ 2.16
Slc1a4O35874 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Slc1a4O35874 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Slc1a4O35874 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Slc1a4O35874 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Slc1a4O35874 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Slc1a4O35874 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Slc1a4O35874 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.53■■■□□ 2.16
Slc1a4O35874 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Slc1a4O35874 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Slc1a4O35874 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
Slc1a4O35874 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Slc1a4O35874 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Slc1a4O35874 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Slc1a4O35874 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.49■■■□□ 2.15
Slc1a4O35874 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Slc1a4O35874 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Slc1a4O35874 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Slc1a4O35874 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Slc1a4O35874 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Slc1a4O35874 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Slc1a4O35874 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Slc1a4O35874 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Slc1a4O35874 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Slc1a4O35874 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Slc1a4O35874 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Slc1a4O35874 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
Slc1a4O35874 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Slc1a4O35874 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Slc1a4O35874 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.43■■■□□ 2.14
Slc1a4O35874 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Slc1a4O35874 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Slc1a4O35874 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Slc1a4O35874 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.42■■■□□ 2.14
Slc1a4O35874 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Slc1a4O35874 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Slc1a4O35874 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.41■■■□□ 2.14
Slc1a4O35874 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Slc1a4O35874 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Slc1a4O35874 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.39■■■□□ 2.14
Slc1a4O35874 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.39■■■□□ 2.14
Slc1a4O35874 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Slc1a4O35874 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Slc1a4O35874 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Slc1a4O35874 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.36■■■□□ 2.13
Slc1a4O35874 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.35■■■□□ 2.13
Slc1a4O35874 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.34■■■□□ 2.13
Slc1a4O35874 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Slc1a4O35874 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Slc1a4O35874 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Slc1a4O35874 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Slc1a4O35874 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Slc1a4O35874 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Slc1a4O35874 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.3■■■□□ 2.12
Slc1a4O35874 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.29■■■□□ 2.12
Slc1a4O35874 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.29■■■□□ 2.12
Slc1a4O35874 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Slc1a4O35874 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms