Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.03■■□□□ 1.92
Sptlc1O35704 Gm7432-201ENSMUST00000210343 879 ntBASIC27.03■■□□□ 1.92
Sptlc1O35704 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sptlc1O35704 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sptlc1O35704 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
Sptlc1O35704 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.02■■□□□ 1.92
Sptlc1O35704 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sptlc1O35704 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Sptlc1O35704 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Sptlc1O35704 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sptlc1O35704 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27■■□□□ 1.91
Sptlc1O35704 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sptlc1O35704 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27■■□□□ 1.91
Sptlc1O35704 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27■■□□□ 1.91
Sptlc1O35704 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Sptlc1O35704 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.99■■□□□ 1.91
Sptlc1O35704 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Sptlc1O35704 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
Sptlc1O35704 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Sptlc1O35704 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.97■■□□□ 1.91
Sptlc1O35704 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Sptlc1O35704 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Sptlc1O35704 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Sptlc1O35704 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.93■■□□□ 1.9
Sptlc1O35704 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Sptlc1O35704 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Sptlc1O35704 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Sptlc1O35704 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Sptlc1O35704 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.89■■□□□ 1.9
Sptlc1O35704 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Sptlc1O35704 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Sptlc1O35704 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Sptlc1O35704 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Sptlc1O35704 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.86■■□□□ 1.89
Sptlc1O35704 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Sptlc1O35704 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Sptlc1O35704 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Sptlc1O35704 Gm11599-201ENSMUST00000118720 878 ntBASIC26.85■■□□□ 1.89
Sptlc1O35704 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Sptlc1O35704 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.83■■□□□ 1.89
Sptlc1O35704 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.83■■□□□ 1.89
Sptlc1O35704 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.83■■□□□ 1.89
Sptlc1O35704 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Sptlc1O35704 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Sptlc1O35704 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Sptlc1O35704 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Sptlc1O35704 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Sptlc1O35704 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sptlc1O35704 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Sptlc1O35704 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sptlc1O35704 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.8■■□□□ 1.88
Sptlc1O35704 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sptlc1O35704 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.79■■□□□ 1.88
Sptlc1O35704 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Sptlc1O35704 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Sptlc1O35704 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.77■■□□□ 1.88
Sptlc1O35704 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sptlc1O35704 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sptlc1O35704 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sptlc1O35704 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.74■■□□□ 1.87
Sptlc1O35704 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Sptlc1O35704 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Sptlc1O35704 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sptlc1O35704 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Sptlc1O35704 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Sptlc1O35704 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Sptlc1O35704 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sptlc1O35704 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Sptlc1O35704 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.71■■□□□ 1.87
Sptlc1O35704 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sptlc1O35704 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.7■■□□□ 1.86
Sptlc1O35704 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.7■■□□□ 1.86
Sptlc1O35704 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.69■■□□□ 1.86
Sptlc1O35704 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Sptlc1O35704 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Sptlc1O35704 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Sptlc1O35704 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sptlc1O35704 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Sptlc1O35704 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Sptlc1O35704 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Sptlc1O35704 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.66■■□□□ 1.86
Sptlc1O35704 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Sptlc1O35704 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sptlc1O35704 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.65■■□□□ 1.86
Sptlc1O35704 Gm30023-201ENSMUST00000197970 889 ntBASIC26.65■■□□□ 1.86
Sptlc1O35704 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Sptlc1O35704 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sptlc1O35704 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sptlc1O35704 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sptlc1O35704 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sptlc1O35704 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sptlc1O35704 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.61■■□□□ 1.85
Sptlc1O35704 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Sptlc1O35704 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Sptlc1O35704 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Sptlc1O35704 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sptlc1O35704 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.59■■□□□ 1.85
Sptlc1O35704 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Sptlc1O35704 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Sptlc1O35704 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 143.6 ms