Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.83■□□□□ 0.61
Tnfsf11O35235 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.83■□□□□ 0.6
Tnfsf11O35235 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf11O35235 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tnfsf11O35235 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tnfsf11O35235 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Tnfsf11O35235 Gm27322-201ENSMUST00000184007 104 ntBASIC18.81■□□□□ 0.6
Tnfsf11O35235 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf11O35235 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf11O35235 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tnfsf11O35235 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf11O35235 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf11O35235 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tnfsf11O35235 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf11O35235 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf11O35235 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Tnfsf11O35235 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf11O35235 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf11O35235 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfsf11O35235 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tnfsf11O35235 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfsf11O35235 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfsf11O35235 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfsf11O35235 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tnfsf11O35235 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfsf11O35235 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfsf11O35235 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tnfsf11O35235 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfsf11O35235 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfsf11O35235 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Tnfsf11O35235 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tnfsf11O35235 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfsf11O35235 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.72■□□□□ 0.59
Tnfsf11O35235 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tnfsf11O35235 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.72■□□□□ 0.59
Tnfsf11O35235 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfsf11O35235 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfsf11O35235 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfsf11O35235 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.58
Tnfsf11O35235 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsf11O35235 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsf11O35235 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsf11O35235 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsf11O35235 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf11O35235 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf11O35235 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf11O35235 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf11O35235 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf11O35235 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf11O35235 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tnfsf11O35235 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf11O35235 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf11O35235 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf11O35235 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsf11O35235 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsf11O35235 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsf11O35235 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.67■□□□□ 0.58
Tnfsf11O35235 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf11O35235 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf11O35235 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Tnfsf11O35235 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf11O35235 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tnfsf11O35235 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf11O35235 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf11O35235 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf11O35235 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf11O35235 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf11O35235 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf11O35235 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfsf11O35235 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsf11O35235 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tnfsf11O35235 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf11O35235 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf11O35235 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.6■□□□□ 0.57
Tnfsf11O35235 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tnfsf11O35235 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfsf11O35235 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfsf11O35235 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfsf11O35235 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfsf11O35235 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tnfsf11O35235 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfsf11O35235 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfsf11O35235 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf11O35235 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf11O35235 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
Tnfsf11O35235 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tnfsf11O35235 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfsf11O35235 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Tnfsf11O35235 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfsf11O35235 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.55■□□□□ 0.56
Tnfsf11O35235 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfsf11O35235 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfsf11O35235 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfsf11O35235 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfsf11O35235 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.53■□□□□ 0.56
Tnfsf11O35235 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tnfsf11O35235 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfsf11O35235 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.52■□□□□ 0.56
Tnfsf11O35235 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfsf11O35235 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms