Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gfra3O35118 Gm8503-201ENSMUST00000118131 455 ntBASIC21.06■□□□□ 0.96
Gfra3O35118 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.06■□□□□ 0.96
Gfra3O35118 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Gfra3O35118 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gfra3O35118 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gfra3O35118 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.05■□□□□ 0.96
Gfra3O35118 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gfra3O35118 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gfra3O35118 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Gfra3O35118 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gfra3O35118 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.04■□□□□ 0.96
Gfra3O35118 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.03■□□□□ 0.96
Gfra3O35118 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.03■□□□□ 0.96
Gfra3O35118 Zxda-201ENSMUST00000117281 2621 ntBASIC21.03■□□□□ 0.96
Gfra3O35118 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gfra3O35118 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gfra3O35118 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gfra3O35118 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gfra3O35118 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.01■□□□□ 0.95
Gfra3O35118 Nkain2-201ENSMUST00000092602 558 ntBASIC21.01■□□□□ 0.95
Gfra3O35118 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Gfra3O35118 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.99■□□□□ 0.95
Gfra3O35118 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gfra3O35118 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gfra3O35118 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Gfra3O35118 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gfra3O35118 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gfra3O35118 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gfra3O35118 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gfra3O35118 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gfra3O35118 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.96■□□□□ 0.95
Gfra3O35118 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Gfra3O35118 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gfra3O35118 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gfra3O35118 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gfra3O35118 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gfra3O35118 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gfra3O35118 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gfra3O35118 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gfra3O35118 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gfra3O35118 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Gfra3O35118 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gfra3O35118 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Gfra3O35118 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gfra3O35118 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gfra3O35118 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gfra3O35118 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gfra3O35118 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gfra3O35118 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gfra3O35118 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gfra3O35118 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gfra3O35118 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gfra3O35118 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gfra3O35118 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gfra3O35118 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.89■□□□□ 0.93
Gfra3O35118 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.88■□□□□ 0.93
Gfra3O35118 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gfra3O35118 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gfra3O35118 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Gfra3O35118 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Gfra3O35118 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Gfra3O35118 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gfra3O35118 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.86■□□□□ 0.93
Gfra3O35118 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.86■□□□□ 0.93
Gfra3O35118 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.86■□□□□ 0.93
Gfra3O35118 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.86■□□□□ 0.93
Gfra3O35118 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gfra3O35118 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gfra3O35118 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.85■□□□□ 0.93
Gfra3O35118 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gfra3O35118 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gfra3O35118 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gfra3O35118 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gfra3O35118 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gfra3O35118 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Gfra3O35118 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Gfra3O35118 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gfra3O35118 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gfra3O35118 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gfra3O35118 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gfra3O35118 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gfra3O35118 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gfra3O35118 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gfra3O35118 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Gfra3O35118 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.79■□□□□ 0.92
Gfra3O35118 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gfra3O35118 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gfra3O35118 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gfra3O35118 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.78■□□□□ 0.92
Gfra3O35118 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.78■□□□□ 0.92
Gfra3O35118 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.78■□□□□ 0.92
Gfra3O35118 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.78■□□□□ 0.92
Gfra3O35118 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Gfra3O35118 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Gfra3O35118 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gfra3O35118 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gfra3O35118 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gfra3O35118 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Gfra3O35118 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms