Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav13d-3J3QMG8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav13d-3J3QMG8 Gm24970-201ENSMUST00000175582 82 ntBASIC21.51■■□□□ 1.03
Trav13d-3J3QMG8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav13d-3J3QMG8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trav13d-3J3QMG8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.49■■□□□ 1.03
Trav13d-3J3QMG8 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.49■■□□□ 1.03
Trav13d-3J3QMG8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav13d-3J3QMG8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav13d-3J3QMG8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav13d-3J3QMG8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav13d-3J3QMG8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Trav13d-3J3QMG8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.48■■□□□ 1.03
Trav13d-3J3QMG8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.48■■□□□ 1.03
Trav13d-3J3QMG8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.48■■□□□ 1.03
Trav13d-3J3QMG8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav13d-3J3QMG8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav13d-3J3QMG8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav13d-3J3QMG8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trav13d-3J3QMG8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav13d-3J3QMG8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav13d-3J3QMG8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trav13d-3J3QMG8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav13d-3J3QMG8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Trav13d-3J3QMG8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trav13d-3J3QMG8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav13d-3J3QMG8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav13d-3J3QMG8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trav13d-3J3QMG8 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.42■■□□□ 1.02
Trav13d-3J3QMG8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.42■■□□□ 1.02
Trav13d-3J3QMG8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav13d-3J3QMG8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Trav13d-3J3QMG8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav13d-3J3QMG8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
Trav13d-3J3QMG8 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.39■■□□□ 1.01
Trav13d-3J3QMG8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav13d-3J3QMG8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav13d-3J3QMG8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Trav13d-3J3QMG8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav13d-3J3QMG8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav13d-3J3QMG8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav13d-3J3QMG8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav13d-3J3QMG8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.35■■□□□ 1.01
Trav13d-3J3QMG8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trav13d-3J3QMG8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.34■■□□□ 1.01
Trav13d-3J3QMG8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trav13d-3J3QMG8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav13d-3J3QMG8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Trav13d-3J3QMG8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav13d-3J3QMG8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav13d-3J3QMG8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav13d-3J3QMG8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav13d-3J3QMG8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trav13d-3J3QMG8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trav13d-3J3QMG8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.3■■□□□ 1
Trav13d-3J3QMG8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trav13d-3J3QMG8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trav13d-3J3QMG8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav13d-3J3QMG8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav13d-3J3QMG8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.28■■□□□ 1
Trav13d-3J3QMG8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav13d-3J3QMG8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trav13d-3J3QMG8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trav13d-3J3QMG8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav13d-3J3QMG8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav13d-3J3QMG8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav13d-3J3QMG8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.26■□□□□ 0.99
Trav13d-3J3QMG8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav13d-3J3QMG8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav13d-3J3QMG8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav13d-3J3QMG8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav13d-3J3QMG8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trav13d-3J3QMG8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav13d-3J3QMG8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav13d-3J3QMG8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav13d-3J3QMG8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trav13d-3J3QMG8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trav13d-3J3QMG8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav13d-3J3QMG8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trav13d-3J3QMG8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav13d-3J3QMG8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.2■□□□□ 0.98
Trav13d-3J3QMG8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav13d-3J3QMG8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trav13d-3J3QMG8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trav13d-3J3QMG8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trav13d-3J3QMG8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav13d-3J3QMG8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav13d-3J3QMG8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav13d-3J3QMG8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav13d-3J3QMG8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav13d-3J3QMG8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trav13d-3J3QMG8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav13d-3J3QMG8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav13d-3J3QMG8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Trav13d-3J3QMG8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav13d-3J3QMG8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trav13d-3J3QMG8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav13d-3J3QMG8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav13d-3J3QMG8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav13d-3J3QMG8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms