Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Gm28038F7BCN9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Gm28038F7BCN9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28038F7BCN9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28038F7BCN9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28038F7BCN9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28038F7BCN9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Gm28038F7BCN9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28038F7BCN9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28038F7BCN9 Gm8109-201ENSMUST00000194076 746 ntBASIC17.83■□□□□ 0.44
Gm28038F7BCN9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28038F7BCN9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28038F7BCN9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28038F7BCN9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28038F7BCN9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28038F7BCN9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28038F7BCN9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28038F7BCN9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28038F7BCN9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28038F7BCN9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28038F7BCN9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.8■□□□□ 0.44
Gm28038F7BCN9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gm28038F7BCN9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28038F7BCN9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28038F7BCN9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Gm28038F7BCN9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm28038F7BCN9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28038F7BCN9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Gm28038F7BCN9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Gm28038F7BCN9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28038F7BCN9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28038F7BCN9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28038F7BCN9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28038F7BCN9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28038F7BCN9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28038F7BCN9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28038F7BCN9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.75■□□□□ 0.43
Gm28038F7BCN9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.74■□□□□ 0.43
Gm28038F7BCN9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28038F7BCN9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gm28038F7BCN9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28038F7BCN9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.72■□□□□ 0.43
Gm28038F7BCN9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.72■□□□□ 0.43
Gm28038F7BCN9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gm28038F7BCN9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28038F7BCN9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Gm28038F7BCN9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28038F7BCN9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28038F7BCN9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28038F7BCN9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm28038F7BCN9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm28038F7BCN9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28038F7BCN9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28038F7BCN9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Gm28038F7BCN9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28038F7BCN9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28038F7BCN9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28038F7BCN9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28038F7BCN9 Peli2-204ENSMUST00000226513 1320 ntBASIC17.68■□□□□ 0.42
Gm28038F7BCN9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Gm28038F7BCN9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28038F7BCN9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28038F7BCN9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm28038F7BCN9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Gm28038F7BCN9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28038F7BCN9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28038F7BCN9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28038F7BCN9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28038F7BCN9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28038F7BCN9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm28038F7BCN9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28038F7BCN9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.64■□□□□ 0.41
Gm28038F7BCN9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28038F7BCN9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28038F7BCN9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28038F7BCN9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28038F7BCN9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28038F7BCN9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28038F7BCN9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28038F7BCN9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28038F7BCN9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28038F7BCN9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28038F7BCN9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm28038F7BCN9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28038F7BCN9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28038F7BCN9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28038F7BCN9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28038F7BCN9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28038F7BCN9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28038F7BCN9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28038F7BCN9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gm28038F7BCN9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28038F7BCN9 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.58■□□□□ 0.41
Gm28038F7BCN9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28038F7BCN9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28038F7BCN9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28038F7BCN9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gm28038F7BCN9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28038F7BCN9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28038F7BCN9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms