Protein–RNA interactions for Protein: D3Z6P9

Ddx43, DEAD (Asp-Glu-Ala-Asp) box polypeptide 43, mousemouse

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx43D3Z6P9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx43D3Z6P9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Ddx43D3Z6P9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx43D3Z6P9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
Ddx43D3Z6P9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.53■■□□□ 1.52
Ddx43D3Z6P9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx43D3Z6P9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx43D3Z6P9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx43D3Z6P9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.52■■□□□ 1.52
Ddx43D3Z6P9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx43D3Z6P9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.52■■□□□ 1.52
Ddx43D3Z6P9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Ddx43D3Z6P9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx43D3Z6P9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx43D3Z6P9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx43D3Z6P9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx43D3Z6P9 Gm6821-201ENSMUST00000107540 542 ntBASIC24.5■■□□□ 1.51
Ddx43D3Z6P9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Ddx43D3Z6P9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx43D3Z6P9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Ddx43D3Z6P9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx43D3Z6P9 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.49■■□□□ 1.51
Ddx43D3Z6P9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.48■■□□□ 1.51
Ddx43D3Z6P9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx43D3Z6P9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx43D3Z6P9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx43D3Z6P9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx43D3Z6P9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx43D3Z6P9 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.45■■□□□ 1.5
Ddx43D3Z6P9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.45■■□□□ 1.5
Ddx43D3Z6P9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx43D3Z6P9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Ddx43D3Z6P9 Nkain2-201ENSMUST00000092602 558 ntBASIC24.44■■□□□ 1.5
Ddx43D3Z6P9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx43D3Z6P9 Gm8503-201ENSMUST00000118131 455 ntBASIC24.43■■□□□ 1.5
Ddx43D3Z6P9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx43D3Z6P9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Ddx43D3Z6P9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx43D3Z6P9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx43D3Z6P9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx43D3Z6P9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Ddx43D3Z6P9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx43D3Z6P9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx43D3Z6P9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx43D3Z6P9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx43D3Z6P9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx43D3Z6P9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.39■■□□□ 1.49
Ddx43D3Z6P9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ddx43D3Z6P9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx43D3Z6P9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx43D3Z6P9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx43D3Z6P9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx43D3Z6P9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx43D3Z6P9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Ddx43D3Z6P9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Ddx43D3Z6P9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx43D3Z6P9 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.36■■□□□ 1.49
Ddx43D3Z6P9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx43D3Z6P9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
Ddx43D3Z6P9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx43D3Z6P9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.35■■□□□ 1.49
Ddx43D3Z6P9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx43D3Z6P9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Ddx43D3Z6P9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.35■■□□□ 1.49
Ddx43D3Z6P9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Ddx43D3Z6P9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx43D3Z6P9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx43D3Z6P9 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.34■■□□□ 1.49
Ddx43D3Z6P9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx43D3Z6P9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx43D3Z6P9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx43D3Z6P9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx43D3Z6P9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx43D3Z6P9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx43D3Z6P9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx43D3Z6P9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx43D3Z6P9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx43D3Z6P9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.29■■□□□ 1.48
Ddx43D3Z6P9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ddx43D3Z6P9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.28■■□□□ 1.48
Ddx43D3Z6P9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.28■■□□□ 1.48
Ddx43D3Z6P9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx43D3Z6P9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx43D3Z6P9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.27■■□□□ 1.48
Ddx43D3Z6P9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx43D3Z6P9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.27■■□□□ 1.48
Ddx43D3Z6P9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx43D3Z6P9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx43D3Z6P9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
Ddx43D3Z6P9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.25■■□□□ 1.47
Ddx43D3Z6P9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx43D3Z6P9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx43D3Z6P9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Ddx43D3Z6P9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.22■■□□□ 1.47
Ddx43D3Z6P9 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.21■■□□□ 1.47
Ddx43D3Z6P9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx43D3Z6P9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx43D3Z6P9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.21■■□□□ 1.47
Ddx43D3Z6P9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Ddx43D3Z6P9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms