Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm12887B1AVM1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Gm12887B1AVM1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm12887B1AVM1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm12887B1AVM1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm12887B1AVM1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm12887B1AVM1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Gm12887B1AVM1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Gm12887B1AVM1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm12887B1AVM1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Gm12887B1AVM1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm12887B1AVM1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Gm12887B1AVM1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm12887B1AVM1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm12887B1AVM1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Gm12887B1AVM1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm12887B1AVM1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm12887B1AVM1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm12887B1AVM1 Gm25262-201ENSMUST00000174934 133 ntBASIC19.49■□□□□ 0.71
Gm12887B1AVM1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.49■□□□□ 0.71
Gm12887B1AVM1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Gm12887B1AVM1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm12887B1AVM1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm12887B1AVM1 Gm27322-201ENSMUST00000184007 104 ntBASIC19.47■□□□□ 0.71
Gm12887B1AVM1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Gm12887B1AVM1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm12887B1AVM1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm12887B1AVM1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.46■□□□□ 0.71
Gm12887B1AVM1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm12887B1AVM1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm12887B1AVM1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm12887B1AVM1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm12887B1AVM1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm12887B1AVM1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.45■□□□□ 0.7
Gm12887B1AVM1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.45■□□□□ 0.7
Gm12887B1AVM1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gm12887B1AVM1 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.44■□□□□ 0.7
Gm12887B1AVM1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Gm12887B1AVM1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm12887B1AVM1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm12887B1AVM1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12887B1AVM1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm12887B1AVM1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12887B1AVM1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12887B1AVM1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm12887B1AVM1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm12887B1AVM1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm12887B1AVM1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm12887B1AVM1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm12887B1AVM1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm12887B1AVM1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm12887B1AVM1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm12887B1AVM1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm12887B1AVM1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm12887B1AVM1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm12887B1AVM1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm12887B1AVM1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm12887B1AVM1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.37■□□□□ 0.69
Gm12887B1AVM1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm12887B1AVM1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Gm12887B1AVM1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.36■□□□□ 0.69
Gm12887B1AVM1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm12887B1AVM1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm12887B1AVM1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm12887B1AVM1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm12887B1AVM1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm12887B1AVM1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm12887B1AVM1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm12887B1AVM1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm12887B1AVM1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm12887B1AVM1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12887B1AVM1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12887B1AVM1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Gm12887B1AVM1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12887B1AVM1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12887B1AVM1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12887B1AVM1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12887B1AVM1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12887B1AVM1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12887B1AVM1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12887B1AVM1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm12887B1AVM1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm12887B1AVM1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm12887B1AVM1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm12887B1AVM1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm12887B1AVM1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Gm12887B1AVM1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm12887B1AVM1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm12887B1AVM1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm12887B1AVM1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm12887B1AVM1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.29■□□□□ 0.68
Gm12887B1AVM1 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.28■□□□□ 0.68
Gm12887B1AVM1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12887B1AVM1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12887B1AVM1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12887B1AVM1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12887B1AVM1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12887B1AVM1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Gm12887B1AVM1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12887B1AVM1 Peli2-204ENSMUST00000226513 1320 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms