Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Ssxa1B1AUS7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ssxa1B1AUS7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.3■■□□□ 1.32
Ssxa1B1AUS7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.29■■□□□ 1.32
Ssxa1B1AUS7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ssxa1B1AUS7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ssxa1B1AUS7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ssxa1B1AUS7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ssxa1B1AUS7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ssxa1B1AUS7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ssxa1B1AUS7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ssxa1B1AUS7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.28■■□□□ 1.32
Ssxa1B1AUS7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ssxa1B1AUS7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ssxa1B1AUS7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ssxa1B1AUS7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ssxa1B1AUS7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ssxa1B1AUS7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ssxa1B1AUS7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ssxa1B1AUS7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ssxa1B1AUS7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.25■■□□□ 1.31
Ssxa1B1AUS7 Amer2-203ENSMUST00000225247 2662 ntBASIC23.25■■□□□ 1.31
Ssxa1B1AUS7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ssxa1B1AUS7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ssxa1B1AUS7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ssxa1B1AUS7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
Ssxa1B1AUS7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ssxa1B1AUS7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ssxa1B1AUS7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ssxa1B1AUS7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ssxa1B1AUS7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.2■■□□□ 1.3
Ssxa1B1AUS7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.2■■□□□ 1.3
Ssxa1B1AUS7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ssxa1B1AUS7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.19■■□□□ 1.3
Ssxa1B1AUS7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ssxa1B1AUS7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
Ssxa1B1AUS7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssxa1B1AUS7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssxa1B1AUS7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ssxa1B1AUS7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ssxa1B1AUS7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ssxa1B1AUS7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ssxa1B1AUS7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ssxa1B1AUS7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ssxa1B1AUS7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ssxa1B1AUS7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ssxa1B1AUS7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ssxa1B1AUS7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ssxa1B1AUS7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.12■■□□□ 1.29
Ssxa1B1AUS7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ssxa1B1AUS7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Ssxa1B1AUS7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ssxa1B1AUS7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ssxa1B1AUS7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ssxa1B1AUS7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ssxa1B1AUS7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ssxa1B1AUS7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ssxa1B1AUS7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ssxa1B1AUS7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.08■■□□□ 1.29
Ssxa1B1AUS7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ssxa1B1AUS7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.08■■□□□ 1.29
Ssxa1B1AUS7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssxa1B1AUS7 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.07■■□□□ 1.28
Ssxa1B1AUS7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssxa1B1AUS7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ssxa1B1AUS7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ssxa1B1AUS7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Ssxa1B1AUS7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.05■■□□□ 1.28
Ssxa1B1AUS7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ssxa1B1AUS7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
Ssxa1B1AUS7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ssxa1B1AUS7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
Ssxa1B1AUS7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.04■■□□□ 1.28
Ssxa1B1AUS7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Ssxa1B1AUS7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ssxa1B1AUS7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ssxa1B1AUS7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ssxa1B1AUS7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ssxa1B1AUS7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ssxa1B1AUS7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ssxa1B1AUS7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.96■■□□□ 1.27
Ssxa1B1AUS7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Ssxa1B1AUS7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ssxa1B1AUS7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ssxa1B1AUS7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ssxa1B1AUS7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ssxa1B1AUS7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ssxa1B1AUS7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ssxa1B1AUS7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ssxa1B1AUS7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ssxa1B1AUS7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.91■■□□□ 1.26
Ssxa1B1AUS7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ssxa1B1AUS7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ssxa1B1AUS7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ssxa1B1AUS7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ssxa1B1AUS7 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.9■■□□□ 1.26
Ssxa1B1AUS7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ssxa1B1AUS7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ssxa1B1AUS7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ssxa1B1AUS7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms