Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ttc39aA2ACP1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ttc39aA2ACP1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.94■■□□□ 1.42
Ttc39aA2ACP1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ttc39aA2ACP1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ttc39aA2ACP1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ttc39aA2ACP1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.93■■□□□ 1.42
Ttc39aA2ACP1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.92■■□□□ 1.42
Ttc39aA2ACP1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ttc39aA2ACP1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.92■■□□□ 1.42
Ttc39aA2ACP1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.92■■□□□ 1.42
Ttc39aA2ACP1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ttc39aA2ACP1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ttc39aA2ACP1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ttc39aA2ACP1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.88■■□□□ 1.41
Ttc39aA2ACP1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.88■■□□□ 1.41
Ttc39aA2ACP1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ttc39aA2ACP1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ttc39aA2ACP1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
Ttc39aA2ACP1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Ttc39aA2ACP1 Gm11599-201ENSMUST00000118720 878 ntBASIC23.85■■□□□ 1.41
Ttc39aA2ACP1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.85■■□□□ 1.41
Ttc39aA2ACP1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ttc39aA2ACP1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ttc39aA2ACP1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.84■■□□□ 1.41
Ttc39aA2ACP1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Ttc39aA2ACP1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ttc39aA2ACP1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.83■■□□□ 1.41
Ttc39aA2ACP1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.83■■□□□ 1.41
Ttc39aA2ACP1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ttc39aA2ACP1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ttc39aA2ACP1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
Ttc39aA2ACP1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.82■■□□□ 1.4
Ttc39aA2ACP1 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.81■■□□□ 1.4
Ttc39aA2ACP1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ttc39aA2ACP1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ttc39aA2ACP1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ttc39aA2ACP1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ttc39aA2ACP1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ttc39aA2ACP1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ttc39aA2ACP1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.78■■□□□ 1.4
Ttc39aA2ACP1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ttc39aA2ACP1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ttc39aA2ACP1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ttc39aA2ACP1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.75■■□□□ 1.39
Ttc39aA2ACP1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.75■■□□□ 1.39
Ttc39aA2ACP1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.74■■□□□ 1.39
Ttc39aA2ACP1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ttc39aA2ACP1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ttc39aA2ACP1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ttc39aA2ACP1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ttc39aA2ACP1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ttc39aA2ACP1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ttc39aA2ACP1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.7■■□□□ 1.38
Ttc39aA2ACP1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ttc39aA2ACP1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ttc39aA2ACP1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ttc39aA2ACP1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ttc39aA2ACP1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ttc39aA2ACP1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ttc39aA2ACP1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ttc39aA2ACP1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ttc39aA2ACP1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ttc39aA2ACP1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ttc39aA2ACP1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ttc39aA2ACP1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ttc39aA2ACP1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Ttc39aA2ACP1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.64■■□□□ 1.37
Ttc39aA2ACP1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ttc39aA2ACP1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.63■■□□□ 1.37
Ttc39aA2ACP1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.63■■□□□ 1.37
Ttc39aA2ACP1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ttc39aA2ACP1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ttc39aA2ACP1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ttc39aA2ACP1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.62■■□□□ 1.37
Ttc39aA2ACP1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.6■■□□□ 1.37
Ttc39aA2ACP1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Ttc39aA2ACP1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ttc39aA2ACP1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.59■■□□□ 1.37
Ttc39aA2ACP1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ttc39aA2ACP1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ttc39aA2ACP1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.58■■□□□ 1.37
Ttc39aA2ACP1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ttc39aA2ACP1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Ttc39aA2ACP1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ttc39aA2ACP1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ttc39aA2ACP1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.56■■□□□ 1.36
Ttc39aA2ACP1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ttc39aA2ACP1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ttc39aA2ACP1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ttc39aA2ACP1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ttc39aA2ACP1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ttc39aA2ACP1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ttc39aA2ACP1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.52■■□□□ 1.36
Ttc39aA2ACP1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.51■■□□□ 1.35
Ttc39aA2ACP1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.51■■□□□ 1.35
Ttc39aA2ACP1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.51■■□□□ 1.35
Ttc39aA2ACP1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ttc39aA2ACP1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ttc39aA2ACP1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms