Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdh7A0A0A6YY83 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
Pcdh7A0A0A6YY83 Amer2-203ENSMUST00000225247 2662 ntBASIC25.32■■□□□ 1.64
Pcdh7A0A0A6YY83 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdh7A0A0A6YY83 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdh7A0A0A6YY83 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Pcdh7A0A0A6YY83 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdh7A0A0A6YY83 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdh7A0A0A6YY83 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Pcdh7A0A0A6YY83 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdh7A0A0A6YY83 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
Pcdh7A0A0A6YY83 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
Pcdh7A0A0A6YY83 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.23■■□□□ 1.63
Pcdh7A0A0A6YY83 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdh7A0A0A6YY83 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdh7A0A0A6YY83 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdh7A0A0A6YY83 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdh7A0A0A6YY83 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdh7A0A0A6YY83 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.23■■□□□ 1.63
Pcdh7A0A0A6YY83 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdh7A0A0A6YY83 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.22■■□□□ 1.63
Pcdh7A0A0A6YY83 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdh7A0A0A6YY83 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Pcdh7A0A0A6YY83 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.21■■□□□ 1.63
Pcdh7A0A0A6YY83 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdh7A0A0A6YY83 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdh7A0A0A6YY83 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdh7A0A0A6YY83 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdh7A0A0A6YY83 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.17■■□□□ 1.62
Pcdh7A0A0A6YY83 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdh7A0A0A6YY83 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.17■■□□□ 1.62
Pcdh7A0A0A6YY83 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh7A0A0A6YY83 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.16■■□□□ 1.62
Pcdh7A0A0A6YY83 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh7A0A0A6YY83 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh7A0A0A6YY83 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.16■■□□□ 1.62
Pcdh7A0A0A6YY83 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Pcdh7A0A0A6YY83 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdh7A0A0A6YY83 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdh7A0A0A6YY83 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdh7A0A0A6YY83 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdh7A0A0A6YY83 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdh7A0A0A6YY83 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdh7A0A0A6YY83 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdh7A0A0A6YY83 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.13■■□□□ 1.61
Pcdh7A0A0A6YY83 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
Pcdh7A0A0A6YY83 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Pcdh7A0A0A6YY83 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Pcdh7A0A0A6YY83 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdh7A0A0A6YY83 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdh7A0A0A6YY83 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Pcdh7A0A0A6YY83 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdh7A0A0A6YY83 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdh7A0A0A6YY83 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.06■■□□□ 1.6
Pcdh7A0A0A6YY83 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdh7A0A0A6YY83 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdh7A0A0A6YY83 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdh7A0A0A6YY83 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdh7A0A0A6YY83 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdh7A0A0A6YY83 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdh7A0A0A6YY83 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdh7A0A0A6YY83 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Pcdh7A0A0A6YY83 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh7A0A0A6YY83 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh7A0A0A6YY83 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdh7A0A0A6YY83 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Pcdh7A0A0A6YY83 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdh7A0A0A6YY83 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.99■■□□□ 1.59
Pcdh7A0A0A6YY83 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.99■■□□□ 1.59
Pcdh7A0A0A6YY83 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdh7A0A0A6YY83 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdh7A0A0A6YY83 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdh7A0A0A6YY83 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdh7A0A0A6YY83 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdh7A0A0A6YY83 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdh7A0A0A6YY83 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Pcdh7A0A0A6YY83 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh7A0A0A6YY83 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh7A0A0A6YY83 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdh7A0A0A6YY83 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdh7A0A0A6YY83 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdh7A0A0A6YY83 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdh7A0A0A6YY83 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdh7A0A0A6YY83 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Pcdh7A0A0A6YY83 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.91■■□□□ 1.58
Pcdh7A0A0A6YY83 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdh7A0A0A6YY83 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdh7A0A0A6YY83 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdh7A0A0A6YY83 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdh7A0A0A6YY83 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Pcdh7A0A0A6YY83 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdh7A0A0A6YY83 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdh7A0A0A6YY83 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Pcdh7A0A0A6YY83 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdh7A0A0A6YY83 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdh7A0A0A6YY83 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh7A0A0A6YY83 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh7A0A0A6YY83 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.85■■□□□ 1.57
Pcdh7A0A0A6YY83 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh7A0A0A6YY83 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms