Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav16nA0A075B634 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav16nA0A075B634 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav16nA0A075B634 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav16nA0A075B634 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav16nA0A075B634 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav16nA0A075B634 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav16nA0A075B634 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Trav16nA0A075B634 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Trav16nA0A075B634 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav16nA0A075B634 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav16nA0A075B634 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav16nA0A075B634 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav16nA0A075B634 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav16nA0A075B634 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav16nA0A075B634 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trav16nA0A075B634 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav16nA0A075B634 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.17■□□□□ 0.5
Trav16nA0A075B634 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav16nA0A075B634 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav16nA0A075B634 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav16nA0A075B634 Peli2-204ENSMUST00000226513 1320 ntBASIC18.16■□□□□ 0.5
Trav16nA0A075B634 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav16nA0A075B634 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trav16nA0A075B634 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav16nA0A075B634 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav16nA0A075B634 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav16nA0A075B634 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav16nA0A075B634 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav16nA0A075B634 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Trav16nA0A075B634 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Trav16nA0A075B634 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav16nA0A075B634 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav16nA0A075B634 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav16nA0A075B634 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav16nA0A075B634 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav16nA0A075B634 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav16nA0A075B634 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav16nA0A075B634 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav16nA0A075B634 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav16nA0A075B634 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav16nA0A075B634 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav16nA0A075B634 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav16nA0A075B634 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav16nA0A075B634 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav16nA0A075B634 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav16nA0A075B634 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav16nA0A075B634 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.09■□□□□ 0.49
Trav16nA0A075B634 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav16nA0A075B634 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Trav16nA0A075B634 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav16nA0A075B634 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.09■□□□□ 0.49
Trav16nA0A075B634 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav16nA0A075B634 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav16nA0A075B634 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Trav16nA0A075B634 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav16nA0A075B634 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav16nA0A075B634 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav16nA0A075B634 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav16nA0A075B634 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav16nA0A075B634 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav16nA0A075B634 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.05■□□□□ 0.48
Trav16nA0A075B634 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav16nA0A075B634 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.05■□□□□ 0.48
Trav16nA0A075B634 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav16nA0A075B634 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav16nA0A075B634 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav16nA0A075B634 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav16nA0A075B634 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav16nA0A075B634 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav16nA0A075B634 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav16nA0A075B634 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav16nA0A075B634 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav16nA0A075B634 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav16nA0A075B634 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav16nA0A075B634 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav16nA0A075B634 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav16nA0A075B634 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav16nA0A075B634 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav16nA0A075B634 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18■□□□□ 0.47
Trav16nA0A075B634 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav16nA0A075B634 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav16nA0A075B634 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav16nA0A075B634 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav16nA0A075B634 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav16nA0A075B634 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav16nA0A075B634 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav16nA0A075B634 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav16nA0A075B634 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav16nA0A075B634 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav16nA0A075B634 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav16nA0A075B634 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav16nA0A075B634 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav16nA0A075B634 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav16nA0A075B634 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trav16nA0A075B634 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trav16nA0A075B634 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav16nA0A075B634 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav16nA0A075B634 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Trav16nA0A075B634 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 186.2 ms