Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4n-4A0A075B615 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4n-4A0A075B615 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4n-4A0A075B615 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav4n-4A0A075B615 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Trav4n-4A0A075B615 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4n-4A0A075B615 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Trav4n-4A0A075B615 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4n-4A0A075B615 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4n-4A0A075B615 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav4n-4A0A075B615 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4n-4A0A075B615 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4n-4A0A075B615 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4n-4A0A075B615 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav4n-4A0A075B615 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4n-4A0A075B615 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Trav4n-4A0A075B615 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4n-4A0A075B615 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4n-4A0A075B615 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4n-4A0A075B615 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4n-4A0A075B615 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4n-4A0A075B615 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4n-4A0A075B615 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4n-4A0A075B615 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trav4n-4A0A075B615 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4n-4A0A075B615 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4n-4A0A075B615 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4n-4A0A075B615 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4n-4A0A075B615 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4n-4A0A075B615 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4n-4A0A075B615 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav4n-4A0A075B615 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trav4n-4A0A075B615 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav4n-4A0A075B615 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.77■□□□□ 0.27
Trav4n-4A0A075B615 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav4n-4A0A075B615 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav4n-4A0A075B615 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4n-4A0A075B615 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav4n-4A0A075B615 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4n-4A0A075B615 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav4n-4A0A075B615 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4n-4A0A075B615 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4n-4A0A075B615 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4n-4A0A075B615 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4n-4A0A075B615 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4n-4A0A075B615 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.73■□□□□ 0.27
Trav4n-4A0A075B615 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4n-4A0A075B615 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4n-4A0A075B615 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4n-4A0A075B615 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.72■□□□□ 0.27
Trav4n-4A0A075B615 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4n-4A0A075B615 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav4n-4A0A075B615 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.72■□□□□ 0.27
Trav4n-4A0A075B615 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4n-4A0A075B615 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav4n-4A0A075B615 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav4n-4A0A075B615 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav4n-4A0A075B615 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4n-4A0A075B615 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4n-4A0A075B615 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4n-4A0A075B615 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.69■□□□□ 0.26
Trav4n-4A0A075B615 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4n-4A0A075B615 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4n-4A0A075B615 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4n-4A0A075B615 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav4n-4A0A075B615 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.68■□□□□ 0.26
Trav4n-4A0A075B615 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4n-4A0A075B615 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4n-4A0A075B615 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.67■□□□□ 0.26
Trav4n-4A0A075B615 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4n-4A0A075B615 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4n-4A0A075B615 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4n-4A0A075B615 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4n-4A0A075B615 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav4n-4A0A075B615 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4n-4A0A075B615 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4n-4A0A075B615 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4n-4A0A075B615 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4n-4A0A075B615 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4n-4A0A075B615 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4n-4A0A075B615 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav4n-4A0A075B615 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4n-4A0A075B615 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4n-4A0A075B615 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4n-4A0A075B615 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav4n-4A0A075B615 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4n-4A0A075B615 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Trav4n-4A0A075B615 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav4n-4A0A075B615 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4n-4A0A075B615 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4n-4A0A075B615 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4n-4A0A075B615 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4n-4A0A075B615 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trav4n-4A0A075B615 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4n-4A0A075B615 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4n-4A0A075B615 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4n-4A0A075B615 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav4n-4A0A075B615 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4n-4A0A075B615 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav4n-4A0A075B615 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms