Protein–RNA interactions for Protein: A0A075B5L3

Igkv4-90, Immunoglobulin kappa chain variable 4-90 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-90A0A075B5L3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-90A0A075B5L3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.77■□□□□ 0.6
Igkv4-90A0A075B5L3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv4-90A0A075B5L3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv4-90A0A075B5L3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.76■□□□□ 0.59
Igkv4-90A0A075B5L3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv4-90A0A075B5L3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv4-90A0A075B5L3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-90A0A075B5L3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-90A0A075B5L3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-90A0A075B5L3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.74■□□□□ 0.59
Igkv4-90A0A075B5L3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv4-90A0A075B5L3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv4-90A0A075B5L3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv4-90A0A075B5L3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv4-90A0A075B5L3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv4-90A0A075B5L3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv4-90A0A075B5L3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv4-90A0A075B5L3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv4-90A0A075B5L3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv4-90A0A075B5L3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igkv4-90A0A075B5L3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igkv4-90A0A075B5L3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igkv4-90A0A075B5L3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Igkv4-90A0A075B5L3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Igkv4-90A0A075B5L3 Gm9397-201ENSMUST00000200125 605 ntBASIC18.69■□□□□ 0.58
Igkv4-90A0A075B5L3 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.69■□□□□ 0.58
Igkv4-90A0A075B5L3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Igkv4-90A0A075B5L3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv4-90A0A075B5L3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Igkv4-90A0A075B5L3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.68■□□□□ 0.58
Igkv4-90A0A075B5L3 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.68■□□□□ 0.58
Igkv4-90A0A075B5L3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv4-90A0A075B5L3 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.68■□□□□ 0.58
Igkv4-90A0A075B5L3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Igkv4-90A0A075B5L3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.67■□□□□ 0.58
Igkv4-90A0A075B5L3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv4-90A0A075B5L3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv4-90A0A075B5L3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv4-90A0A075B5L3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv4-90A0A075B5L3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv4-90A0A075B5L3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv4-90A0A075B5L3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv4-90A0A075B5L3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.65■□□□□ 0.58
Igkv4-90A0A075B5L3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.65■□□□□ 0.58
Igkv4-90A0A075B5L3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.65■□□□□ 0.58
Igkv4-90A0A075B5L3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv4-90A0A075B5L3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv4-90A0A075B5L3 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.64■□□□□ 0.57
Igkv4-90A0A075B5L3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv4-90A0A075B5L3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv4-90A0A075B5L3 Gm24970-201ENSMUST00000175582 82 ntBASIC18.63■□□□□ 0.57
Igkv4-90A0A075B5L3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.63■□□□□ 0.57
Igkv4-90A0A075B5L3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv4-90A0A075B5L3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv4-90A0A075B5L3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv4-90A0A075B5L3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.6■□□□□ 0.57
Igkv4-90A0A075B5L3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv4-90A0A075B5L3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv4-90A0A075B5L3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.59■□□□□ 0.57
Igkv4-90A0A075B5L3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.59■□□□□ 0.57
Igkv4-90A0A075B5L3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv4-90A0A075B5L3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv4-90A0A075B5L3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Igkv4-90A0A075B5L3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv4-90A0A075B5L3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.57■□□□□ 0.56
Igkv4-90A0A075B5L3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv4-90A0A075B5L3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv4-90A0A075B5L3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv4-90A0A075B5L3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Igkv4-90A0A075B5L3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv4-90A0A075B5L3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv4-90A0A075B5L3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Igkv4-90A0A075B5L3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv4-90A0A075B5L3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv4-90A0A075B5L3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv4-90A0A075B5L3 Gm45855-201ENSMUST00000212546 880 ntBASIC18.53■□□□□ 0.56
Igkv4-90A0A075B5L3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Igkv4-90A0A075B5L3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv4-90A0A075B5L3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.52■□□□□ 0.56
Igkv4-90A0A075B5L3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.52■□□□□ 0.55
Igkv4-90A0A075B5L3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv4-90A0A075B5L3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv4-90A0A075B5L3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv4-90A0A075B5L3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv4-90A0A075B5L3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv4-90A0A075B5L3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv4-90A0A075B5L3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.49■□□□□ 0.55
Igkv4-90A0A075B5L3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv4-90A0A075B5L3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv4-90A0A075B5L3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv4-90A0A075B5L3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv4-90A0A075B5L3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Igkv4-90A0A075B5L3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv4-90A0A075B5L3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv4-90A0A075B5L3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv4-90A0A075B5L3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv4-90A0A075B5L3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.44■□□□□ 0.54
Igkv4-90A0A075B5L3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Igkv4-90A0A075B5L3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms