Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHB3Q9Y5E6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB3Q9Y5E6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 AC069152.1-201ENST00000438030 544 ntBASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 FAM201B-201ENST00000458407 597 ntBASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB3Q9Y5E6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB3Q9Y5E6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 AC073210.2-201ENST00000430369 194 ntBASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB3Q9Y5E6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 CYP2T1P-201ENST00000432607 1285 ntBASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 MIR4758-201ENST00000577688 71 ntBASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 AC243732.1-201ENST00000612648 864 ntBASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB3Q9Y5E6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.79
PCDHB3Q9Y5E6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.95■□□□□ 0.79
PCDHB3Q9Y5E6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHB3Q9Y5E6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PCDHB3Q9Y5E6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHB3Q9Y5E6 RBM17P2-201ENST00000616397 1405 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms