Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX41Q9UJV9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX41Q9UJV9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.5■■□□□ 1.35
DDX41Q9UJV9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX41Q9UJV9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX41Q9UJV9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX41Q9UJV9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX41Q9UJV9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX41Q9UJV9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 DUSP5P2-201ENST00000426873 1033 ntBASIC23.49■■□□□ 1.35
DDX41Q9UJV9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX41Q9UJV9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 AL157384.1-201ENST00000445995 2473 ntBASIC23.48■■□□□ 1.35
DDX41Q9UJV9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 POU5F1P3-201ENST00000428824 1078 ntBASIC23.48■■□□□ 1.35
DDX41Q9UJV9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX41Q9UJV9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX41Q9UJV9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 AL355472.2-201ENST00000422958 438 ntBASIC23.46■■□□□ 1.35
DDX41Q9UJV9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 CDV3P1-201ENST00000471403 739 ntBASIC23.46■■□□□ 1.35
DDX41Q9UJV9 LINC01521-201ENST00000504184 1943 ntBASIC23.46■■□□□ 1.35
DDX41Q9UJV9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX41Q9UJV9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
DDX41Q9UJV9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.45■■□□□ 1.34
DDX41Q9UJV9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 AC100791.3-201ENST00000617619 330 ntBASIC23.45■■□□□ 1.34
DDX41Q9UJV9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX41Q9UJV9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
DDX41Q9UJV9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX41Q9UJV9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX41Q9UJV9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX41Q9UJV9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
DDX41Q9UJV9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX41Q9UJV9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
DDX41Q9UJV9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms