Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 MCRIP2P1-201ENST00000394346 511 ntBASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM7Q9NR12 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 TSPY7P-201ENST00000431358 1114 ntBASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 CDV3P1-201ENST00000471403 739 ntBASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM7Q9NR12 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.02■■□□□ 1.28
PDLIM7Q9NR12 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 RPS2P55-201ENST00000397318 883 ntBASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 AC107956.1-201ENST00000494359 873 ntBASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDLIM7Q9NR12 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 WWC2-AS2-201ENST00000578387 2183 ntBASIC23■■□□□ 1.27
PDLIM7Q9NR12 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 POM121L13P-201ENST00000422362 380 ntBASIC23■■□□□ 1.27
PDLIM7Q9NR12 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
PDLIM7Q9NR12 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23■■□□□ 1.27
PDLIM7Q9NR12 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms