Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRDL1Q9BU40 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 CCDC92B-201ENST00000575506 885 ntBASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 TERF1P2-201ENST00000583350 1212 ntBASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CHRDL1Q9BU40 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRDL1Q9BU40 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 AP004607.4-201ENST00000530158 1459 ntBASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRDL1Q9BU40 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 KRT18P14-201ENST00000534205 1250 ntBASIC16.15■□□□□ 0.18
CHRDL1Q9BU40 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms