Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AC139426.1-201ENST00000568218 2529 ntBASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 HOMER2P1-201ENST00000455653 964 ntBASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 SART3-203ENST00000546611 1184 ntBASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 COX20P2-201ENST00000452636 358 ntBASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 RFPL4AP1-201ENST00000530883 850 ntBASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 HNRNPA1P28-201ENST00000424481 961 ntBASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 AL031008.1-201ENST00000619963 541 ntBASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 AC092364.2-202ENST00000597012 1073 ntBASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 AC005829.2-201ENST00000571422 1056 ntBASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC8.42□□□□□ -1.06
SYNE2Q8WXH0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 C2orf69P3-201ENST00000565542 1120 ntBASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 TERC-201ENST00000602385 541 ntBASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 PENK-208ENST00000523051 772 ntTSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC8.41□□□□□ -1.06
SYNE2Q8WXH0 AC124283.5-201ENST00000624661 1809 ntBASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms