Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC28.61■■■□□ 2.17
ARHGEF28Q8N1W1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
ARHGEF28Q8N1W1 AL117328.2-201ENST00000624617 1940 ntBASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 RN7SL471P-201ENST00000580476 299 ntBASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC28.59■■■□□ 2.17
ARHGEF28Q8N1W1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 AC133681.1-201ENST00000465482 601 ntBASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ARHGEF28Q8N1W1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
ARHGEF28Q8N1W1 HES2-206ENST00000489730 730 ntTSL 2 BASIC28.57■■■□□ 2.16
ARHGEF28Q8N1W1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ARHGEF28Q8N1W1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC28.57■■■□□ 2.16
ARHGEF28Q8N1W1 AC239809.2-201ENST00000415381 517 ntBASIC28.57■■■□□ 2.16
ARHGEF28Q8N1W1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC28.57■■■□□ 2.16
ARHGEF28Q8N1W1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC28.57■■■□□ 2.16
ARHGEF28Q8N1W1 MIR4497-201ENST00000583208 89 ntBASIC28.57■■■□□ 2.16
ARHGEF28Q8N1W1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ARHGEF28Q8N1W1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ARHGEF28Q8N1W1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ARHGEF28Q8N1W1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC28.56■■■□□ 2.16
ARHGEF28Q8N1W1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC28.56■■■□□ 2.16
ARHGEF28Q8N1W1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC28.56■■■□□ 2.16
ARHGEF28Q8N1W1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC28.56■■■□□ 2.16
ARHGEF28Q8N1W1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
ARHGEF28Q8N1W1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ARHGEF28Q8N1W1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
ARHGEF28Q8N1W1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC28.54■■■□□ 2.16
ARHGEF28Q8N1W1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ARHGEF28Q8N1W1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
ARHGEF28Q8N1W1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ARHGEF28Q8N1W1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
ARHGEF28Q8N1W1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
ARHGEF28Q8N1W1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ARHGEF28Q8N1W1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC28.53■■■□□ 2.16
ARHGEF28Q8N1W1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC28.52■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms