Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC30.68■■■□□ 2.5
ABCA6Q8N139 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC30.68■■■□□ 2.5
ABCA6Q8N139 SRI-203ENST00000419179 1307 ntTSL 2 BASIC30.68■■■□□ 2.5
ABCA6Q8N139 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ABCA6Q8N139 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC30.67■■■□□ 2.5
ABCA6Q8N139 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ABCA6Q8N139 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
ABCA6Q8N139 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.67■■■□□ 2.5
ABCA6Q8N139 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ABCA6Q8N139 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC30.67■■■□□ 2.5
ABCA6Q8N139 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ABCA6Q8N139 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC30.67■■■□□ 2.5
ABCA6Q8N139 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC30.66■■■□□ 2.5
ABCA6Q8N139 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
ABCA6Q8N139 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC30.66■■■□□ 2.5
ABCA6Q8N139 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ABCA6Q8N139 PGM5P4-201ENST00000421970 445 ntBASIC30.66■■■□□ 2.5
ABCA6Q8N139 BRWD1-AS2-201ENST00000603064 1028 ntBASIC30.66■■■□□ 2.5
ABCA6Q8N139 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
ABCA6Q8N139 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ABCA6Q8N139 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC30.66■■■□□ 2.5
ABCA6Q8N139 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.66■■■□□ 2.5
ABCA6Q8N139 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
ABCA6Q8N139 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ABCA6Q8N139 AC079598.2-202ENST00000546624 1451 ntBASIC30.66■■■□□ 2.5
ABCA6Q8N139 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC30.66■■■□□ 2.5
ABCA6Q8N139 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ABCA6Q8N139 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
ABCA6Q8N139 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC30.65■■■□□ 2.5
ABCA6Q8N139 REXO1L10P-201ENST00000615707 1290 ntBASIC30.65■■■□□ 2.5
ABCA6Q8N139 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
ABCA6Q8N139 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
ABCA6Q8N139 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ABCA6Q8N139 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ABCA6Q8N139 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ABCA6Q8N139 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
ABCA6Q8N139 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC30.65■■■□□ 2.5
ABCA6Q8N139 DECR2-212ENST00000627716 352 ntTSL 2 BASIC30.65■■■□□ 2.5
ABCA6Q8N139 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC30.65■■■□□ 2.5
ABCA6Q8N139 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC30.65■■■□□ 2.5
ABCA6Q8N139 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
ABCA6Q8N139 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ABCA6Q8N139 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
ABCA6Q8N139 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ABCA6Q8N139 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ABCA6Q8N139 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC30.64■■■□□ 2.5
ABCA6Q8N139 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC30.64■■■□□ 2.5
ABCA6Q8N139 DUT-205ENST00000558813 769 ntTSL 2 BASIC30.64■■■□□ 2.5
ABCA6Q8N139 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
ABCA6Q8N139 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
ABCA6Q8N139 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
ABCA6Q8N139 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
ABCA6Q8N139 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ABCA6Q8N139 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
ABCA6Q8N139 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ABCA6Q8N139 AC005521.1-201ENST00000393351 872 ntBASIC30.63■■■□□ 2.49
ABCA6Q8N139 AL353807.1-201ENST00000427475 662 ntBASIC30.63■■■□□ 2.49
ABCA6Q8N139 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC30.63■■■□□ 2.49
ABCA6Q8N139 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC30.63■■■□□ 2.49
ABCA6Q8N139 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ABCA6Q8N139 KRT16P5-201ENST00000455284 522 ntBASIC30.62■■■□□ 2.49
ABCA6Q8N139 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
ABCA6Q8N139 HTR7P1-201ENST00000538670 1336 ntBASIC30.62■■■□□ 2.49
ABCA6Q8N139 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ABCA6Q8N139 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC30.62■■■□□ 2.49
ABCA6Q8N139 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
ABCA6Q8N139 FAM197Y1-201ENST00000421178 764 ntBASIC30.62■■■□□ 2.49
ABCA6Q8N139 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
ABCA6Q8N139 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
ABCA6Q8N139 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ABCA6Q8N139 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
ABCA6Q8N139 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
ABCA6Q8N139 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ABCA6Q8N139 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ABCA6Q8N139 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ABCA6Q8N139 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ABCA6Q8N139 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ABCA6Q8N139 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 TERF1P1-201ENST00000311003 1181 ntBASIC30.61■■■□□ 2.49
ABCA6Q8N139 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 FDX2-207ENST00000494368 584 ntTSL 4 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 NME3-204ENST00000563498 920 ntTSL 2 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 AP000525.1-201ENST00000608286 694 ntBASIC30.61■■■□□ 2.49
ABCA6Q8N139 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC30.61■■■□□ 2.49
ABCA6Q8N139 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC30.6■■■□□ 2.49
ABCA6Q8N139 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC30.6■■■□□ 2.49
ABCA6Q8N139 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
ABCA6Q8N139 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
ABCA6Q8N139 AL390719.1-204ENST00000412397 1219 ntBASIC30.6■■■□□ 2.49
ABCA6Q8N139 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC30.6■■■□□ 2.49
ABCA6Q8N139 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ABCA6Q8N139 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC30.59■■■□□ 2.49
ABCA6Q8N139 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
ABCA6Q8N139 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ABCA6Q8N139 AL121829.2-201ENST00000620908 328 ntBASIC30.59■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms