Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 KRT18P22-201ENST00000402024 1347 ntBASIC31.53■■■□□ 2.64
CD109Q6YHK3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CD109Q6YHK3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
CD109Q6YHK3 AC093323.1-202ENST00000635031 2045 ntBASIC31.53■■■□□ 2.64
CD109Q6YHK3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CD109Q6YHK3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CD109Q6YHK3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CD109Q6YHK3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC31.52■■■□□ 2.64
CD109Q6YHK3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
CD109Q6YHK3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CD109Q6YHK3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC31.52■■■□□ 2.64
CD109Q6YHK3 AC087388.1-201ENST00000571370 1112 ntBASIC31.52■■■□□ 2.64
CD109Q6YHK3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC31.52■■■□□ 2.64
CD109Q6YHK3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC31.52■■■□□ 2.64
CD109Q6YHK3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CD109Q6YHK3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC31.52■■■□□ 2.64
CD109Q6YHK3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.52■■■□□ 2.64
CD109Q6YHK3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CD109Q6YHK3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC31.51■■■□□ 2.64
CD109Q6YHK3 AL390955.1-201ENST00000428694 934 ntBASIC31.51■■■□□ 2.64
CD109Q6YHK3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CD109Q6YHK3 NAPSB-206ENST00000562112 1266 ntBASIC31.51■■■□□ 2.64
CD109Q6YHK3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC31.51■■■□□ 2.63
CD109Q6YHK3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC31.51■■■□□ 2.63
CD109Q6YHK3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CD109Q6YHK3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC31.51■■■□□ 2.63
CD109Q6YHK3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CD109Q6YHK3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CD109Q6YHK3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
CD109Q6YHK3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC31.5■■■□□ 2.63
CD109Q6YHK3 WWOX-216ENST00000569818 525 ntBASIC31.5■■■□□ 2.63
CD109Q6YHK3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC31.5■■■□□ 2.63
CD109Q6YHK3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC31.5■■■□□ 2.63
CD109Q6YHK3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CD109Q6YHK3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CD109Q6YHK3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CD109Q6YHK3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CD109Q6YHK3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CD109Q6YHK3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CD109Q6YHK3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CD109Q6YHK3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CD109Q6YHK3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CD109Q6YHK3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CD109Q6YHK3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CD109Q6YHK3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CD109Q6YHK3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 PGM5P4-201ENST00000421970 445 ntBASIC31.49■■■□□ 2.63
CD109Q6YHK3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC31.49■■■□□ 2.63
CD109Q6YHK3 FITM1-202ENST00000559294 800 ntBASIC31.49■■■□□ 2.63
CD109Q6YHK3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
CD109Q6YHK3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CD109Q6YHK3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CD109Q6YHK3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CD109Q6YHK3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CD109Q6YHK3 NBPF21P-201ENST00000425093 1451 ntBASIC31.48■■■□□ 2.63
CD109Q6YHK3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
CD109Q6YHK3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC31.48■■■□□ 2.63
CD109Q6YHK3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CD109Q6YHK3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC31.48■■■□□ 2.63
CD109Q6YHK3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC31.48■■■□□ 2.63
CD109Q6YHK3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CD109Q6YHK3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC31.48■■■□□ 2.63
CD109Q6YHK3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
CD109Q6YHK3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CD109Q6YHK3 AC010542.4-201ENST00000563151 1910 ntBASIC31.47■■■□□ 2.63
CD109Q6YHK3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC31.47■■■□□ 2.63
CD109Q6YHK3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC31.47■■■□□ 2.63
CD109Q6YHK3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC31.47■■■□□ 2.63
CD109Q6YHK3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC31.47■■■□□ 2.63
CD109Q6YHK3 AL356652.1-201ENST00000615962 565 ntBASIC31.47■■■□□ 2.63
CD109Q6YHK3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
CD109Q6YHK3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.46■■■□□ 2.63
CD109Q6YHK3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CD109Q6YHK3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CD109Q6YHK3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC31.46■■■□□ 2.63
CD109Q6YHK3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC31.46■■■□□ 2.63
CD109Q6YHK3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC31.46■■■□□ 2.63
CD109Q6YHK3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC31.46■■■□□ 2.63
CD109Q6YHK3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC31.46■■■□□ 2.63
CD109Q6YHK3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CD109Q6YHK3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CD109Q6YHK3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CD109Q6YHK3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC31.45■■■□□ 2.63
CD109Q6YHK3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC31.45■■■□□ 2.63
CD109Q6YHK3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CD109Q6YHK3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC31.45■■■□□ 2.63
CD109Q6YHK3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CD109Q6YHK3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CD109Q6YHK3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CD109Q6YHK3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CD109Q6YHK3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CD109Q6YHK3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms