Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC33.85■■■■□ 3.01
SNAPC4Q5SXM2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC33.85■■■■□ 3.01
SNAPC4Q5SXM2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
SNAPC4Q5SXM2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC33.85■■■■□ 3.01
SNAPC4Q5SXM2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 CYP2D8P-201ENST00000433633 1490 ntBASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
SNAPC4Q5SXM2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 UNC93B2-201ENST00000285383 730 ntBASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC33.83■■■■□ 3.01
SNAPC4Q5SXM2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
SNAPC4Q5SXM2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC33.82■■■■□ 3.01
SNAPC4Q5SXM2 MIR1238-201ENST00000408483 83 ntBASIC33.82■■■■□ 3.01
SNAPC4Q5SXM2 AL390719.1-204ENST00000412397 1219 ntBASIC33.82■■■■□ 3.01
SNAPC4Q5SXM2 AC010947.1-201ENST00000623454 693 ntBASIC33.82■■■■□ 3.01
SNAPC4Q5SXM2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC33.82■■■■□ 3.01
SNAPC4Q5SXM2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC33.82■■■■□ 3
SNAPC4Q5SXM2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC33.82■■■■□ 3
SNAPC4Q5SXM2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC33.82■■■■□ 3
SNAPC4Q5SXM2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC33.82■■■■□ 3
SNAPC4Q5SXM2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
SNAPC4Q5SXM2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC33.82■■■■□ 3
SNAPC4Q5SXM2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC33.82■■■■□ 3
SNAPC4Q5SXM2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC33.81■■■■□ 3
SNAPC4Q5SXM2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC33.81■■■■□ 3
SNAPC4Q5SXM2 AC010542.4-201ENST00000563151 1910 ntBASIC33.81■■■■□ 3
SNAPC4Q5SXM2 AC092053.2-201ENST00000640557 1818 ntBASIC33.81■■■■□ 3
SNAPC4Q5SXM2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC33.81■■■■□ 3
SNAPC4Q5SXM2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC33.81■■■■□ 3
SNAPC4Q5SXM2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
SNAPC4Q5SXM2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC33.81■■■■□ 3
SNAPC4Q5SXM2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC33.81■■■■□ 3
SNAPC4Q5SXM2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC33.81■■■■□ 3
SNAPC4Q5SXM2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC33.8■■■■□ 3
SNAPC4Q5SXM2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC33.8■■■■□ 3
SNAPC4Q5SXM2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
SNAPC4Q5SXM2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC33.8■■■■□ 3
SNAPC4Q5SXM2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC33.8■■■■□ 3
SNAPC4Q5SXM2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
SNAPC4Q5SXM2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC33.8■■■■□ 3
SNAPC4Q5SXM2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 AC073195.1-201ENST00000607241 877 ntBASIC33.79■■■■□ 3
SNAPC4Q5SXM2 AL356652.1-201ENST00000615962 565 ntBASIC33.79■■■■□ 3
SNAPC4Q5SXM2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC33.79■■■■□ 3
SNAPC4Q5SXM2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
SNAPC4Q5SXM2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
SNAPC4Q5SXM2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC33.78■■■■□ 3
SNAPC4Q5SXM2 WWOX-216ENST00000569818 525 ntBASIC33.78■■■■□ 3
SNAPC4Q5SXM2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
SNAPC4Q5SXM2 AL121829.2-201ENST00000620908 328 ntBASIC33.78■■■■□ 3
SNAPC4Q5SXM2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC33.77■■■■□ 3
SNAPC4Q5SXM2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC33.76■■■■□ 3
SNAPC4Q5SXM2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC33.76■■■■□ 3
SNAPC4Q5SXM2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC33.76■■■■□ 3
SNAPC4Q5SXM2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC33.76■■■■□ 3
SNAPC4Q5SXM2 AC006011.2-201ENST00000621313 1158 ntBASIC33.76■■■■□ 3
SNAPC4Q5SXM2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC33.76■■■■□ 3
SNAPC4Q5SXM2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
SNAPC4Q5SXM2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC33.76■■■■□ 3
SNAPC4Q5SXM2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC33.76■■■□□ 2.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms