Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAE1P78406 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RAE1P78406 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.46■□□□□ 0.71
RAE1P78406 TERF1P5-201ENST00000477545 1207 ntBASIC19.46■□□□□ 0.71
RAE1P78406 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAE1P78406 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.46■□□□□ 0.71
RAE1P78406 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAE1P78406 AC010536.3-201ENST00000620306 533 ntBASIC19.46■□□□□ 0.71
RAE1P78406 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.46■□□□□ 0.71
RAE1P78406 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAE1P78406 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAE1P78406 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAE1P78406 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAE1P78406 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.46■□□□□ 0.71
RAE1P78406 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAE1P78406 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAE1P78406 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAE1P78406 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.46■□□□□ 0.71
RAE1P78406 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAE1P78406 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RAE1P78406 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.45■□□□□ 0.7
RAE1P78406 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.45■□□□□ 0.7
RAE1P78406 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAE1P78406 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAE1P78406 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAE1P78406 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAE1P78406 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAE1P78406 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
RAE1P78406 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAE1P78406 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAE1P78406 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.44■□□□□ 0.7
RAE1P78406 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.44■□□□□ 0.7
RAE1P78406 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAE1P78406 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAE1P78406 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAE1P78406 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.44■□□□□ 0.7
RAE1P78406 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAE1P78406 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.44■□□□□ 0.7
RAE1P78406 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.44■□□□□ 0.7
RAE1P78406 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.44■□□□□ 0.7
RAE1P78406 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAE1P78406 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.44■□□□□ 0.7
RAE1P78406 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.43■□□□□ 0.7
RAE1P78406 AC099778.1-201ENST00000568593 1911 ntBASIC19.43■□□□□ 0.7
RAE1P78406 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.43■□□□□ 0.7
RAE1P78406 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.43■□□□□ 0.7
RAE1P78406 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.43■□□□□ 0.7
RAE1P78406 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.43■□□□□ 0.7
RAE1P78406 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.43■□□□□ 0.7
RAE1P78406 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
RAE1P78406 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAE1P78406 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAE1P78406 KRT8P36-201ENST00000489121 1440 ntBASIC19.42■□□□□ 0.7
RAE1P78406 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAE1P78406 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.42■□□□□ 0.7
RAE1P78406 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.42■□□□□ 0.7
RAE1P78406 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAE1P78406 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAE1P78406 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAE1P78406 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAE1P78406 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.42■□□□□ 0.7
RAE1P78406 CDV3P1-201ENST00000471403 739 ntBASIC19.42■□□□□ 0.7
RAE1P78406 AC137761.2-201ENST00000561729 223 ntBASIC19.42■□□□□ 0.7
RAE1P78406 AC145350.3-201ENST00000569033 163 ntBASIC19.42■□□□□ 0.7
RAE1P78406 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAE1P78406 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.42■□□□□ 0.7
RAE1P78406 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAE1P78406 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
RAE1P78406 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAE1P78406 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAE1P78406 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAE1P78406 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAE1P78406 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAE1P78406 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAE1P78406 AC112907.3-201ENST00000577781 2400 ntBASIC19.41■□□□□ 0.7
RAE1P78406 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RAE1P78406 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAE1P78406 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RAE1P78406 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAE1P78406 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.41■□□□□ 0.7
RAE1P78406 MFSD11-216ENST00000590393 1141 ntBASIC19.41■□□□□ 0.7
RAE1P78406 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms