Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ERCC2P18074 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC2P18074 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
ERCC2P18074 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC2P18074 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
ERCC2P18074 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.08■□□□□ 0.97
ERCC2P18074 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC2P18074 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.08■□□□□ 0.97
ERCC2P18074 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC2P18074 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.08■□□□□ 0.97
ERCC2P18074 AC005181.1-201ENST00000604782 1256 ntBASIC21.08■□□□□ 0.97
ERCC2P18074 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
ERCC2P18074 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.08■□□□□ 0.96
ERCC2P18074 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ERCC2P18074 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ERCC2P18074 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ERCC2P18074 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
ERCC2P18074 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.07■□□□□ 0.96
ERCC2P18074 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ERCC2P18074 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC2P18074 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC2P18074 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.07■□□□□ 0.96
ERCC2P18074 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.07■□□□□ 0.96
ERCC2P18074 AC026185.1-201ENST00000445748 174 ntBASIC21.07■□□□□ 0.96
ERCC2P18074 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.07■□□□□ 0.96
ERCC2P18074 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.07■□□□□ 0.96
ERCC2P18074 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.07■□□□□ 0.96
ERCC2P18074 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.07■□□□□ 0.96
ERCC2P18074 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.07■□□□□ 0.96
ERCC2P18074 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC2P18074 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC2P18074 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.07■□□□□ 0.96
ERCC2P18074 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC2P18074 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.07■□□□□ 0.96
ERCC2P18074 AC073314.1-201ENST00000568729 2216 ntBASIC21.06■□□□□ 0.96
ERCC2P18074 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC2P18074 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.06■□□□□ 0.96
ERCC2P18074 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.06■□□□□ 0.96
ERCC2P18074 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
ERCC2P18074 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC2P18074 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 AC069236.1-201ENST00000604339 616 ntBASIC21.06■□□□□ 0.96
ERCC2P18074 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 CYP21A1P-202ENST00000354927 1481 ntBASIC21.06■□□□□ 0.96
ERCC2P18074 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC2P18074 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ERCC2P18074 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
ERCC2P18074 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.05■□□□□ 0.96
ERCC2P18074 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ERCC2P18074 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC2P18074 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.05■□□□□ 0.96
ERCC2P18074 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.05■□□□□ 0.96
ERCC2P18074 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.04■□□□□ 0.96
ERCC2P18074 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.04■□□□□ 0.96
ERCC2P18074 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
ERCC2P18074 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC2P18074 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC2P18074 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC2P18074 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC2P18074 AL050303.2-201ENST00000619798 666 ntBASIC21.04■□□□□ 0.96
ERCC2P18074 AC008694.1-202ENST00000636953 945 ntBASIC21.04■□□□□ 0.96
ERCC2P18074 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ERCC2P18074 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ERCC2P18074 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC2P18074 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ERCC2P18074 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC2P18074 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC2P18074 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.03■□□□□ 0.96
ERCC2P18074 AP005212.1-201ENST00000581547 1997 ntBASIC21.03■□□□□ 0.96
ERCC2P18074 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC2P18074 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC2P18074 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.03■□□□□ 0.96
ERCC2P18074 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.03■□□□□ 0.96
ERCC2P18074 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.03■□□□□ 0.96
ERCC2P18074 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC2P18074 CROCCP5-201ENST00000436658 830 ntBASIC21.03■□□□□ 0.96
ERCC2P18074 OR10C1-204ENST00000622521 1039 ntBASIC21.03■□□□□ 0.96
ERCC2P18074 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC2P18074 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC2P18074 LINC01006-201ENST00000333319 2292 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms