Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cd74P04441 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cd74P04441 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.96□□□□□ -0.01
Cd74P04441 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cd74P04441 Gm12527-201ENSMUST00000117967 564 ntBASIC14.96□□□□□ -0.01
Cd74P04441 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.96□□□□□ -0.01
Cd74P04441 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.96□□□□□ -0.01
Cd74P04441 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cd74P04441 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd74P04441 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cd74P04441 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Cd74P04441 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cd74P04441 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.95□□□□□ -0.02
Cd74P04441 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cd74P04441 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.95□□□□□ -0.02
Cd74P04441 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.95□□□□□ -0.02
Cd74P04441 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.95□□□□□ -0.02
Cd74P04441 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cd74P04441 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd74P04441 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.95□□□□□ -0.02
Cd74P04441 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.94□□□□□ -0.02
Cd74P04441 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cd74P04441 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cd74P04441 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Gm26524-201ENSMUST00000192339 390 ntBASIC14.94□□□□□ -0.02
Cd74P04441 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.94□□□□□ -0.02
Cd74P04441 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd74P04441 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.94□□□□□ -0.02
Cd74P04441 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cd74P04441 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.93□□□□□ -0.02
Cd74P04441 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.93□□□□□ -0.02
Cd74P04441 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cd74P04441 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Cd74P04441 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Cd74P04441 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd74P04441 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Cd74P04441 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd74P04441 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.92□□□□□ -0.02
Cd74P04441 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd74P04441 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.92□□□□□ -0.02
Cd74P04441 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cd74P04441 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd74P04441 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Cd74P04441 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd74P04441 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd74P04441 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.92□□□□□ -0.02
Cd74P04441 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cd74P04441 Gm13168-201ENSMUST00000121771 632 ntBASIC14.92□□□□□ -0.02
Cd74P04441 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms