Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.48■■□□□ 1.03
TRUB2O95900 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.48■■□□□ 1.03
TRUB2O95900 OR10C1-204ENST00000622521 1039 ntBASIC21.48■■□□□ 1.03
TRUB2O95900 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB2O95900 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB2O95900 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.48■■□□□ 1.03
TRUB2O95900 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.48■■□□□ 1.03
TRUB2O95900 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.47■■□□□ 1.03
TRUB2O95900 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB2O95900 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TRUB2O95900 NCF1B-203ENST00000435988 1254 ntBASIC21.47■■□□□ 1.03
TRUB2O95900 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.47■■□□□ 1.03
TRUB2O95900 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.47■■□□□ 1.03
TRUB2O95900 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRUB2O95900 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TRUB2O95900 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB2O95900 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB2O95900 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB2O95900 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB2O95900 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB2O95900 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRUB2O95900 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB2O95900 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB2O95900 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRUB2O95900 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRUB2O95900 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB2O95900 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB2O95900 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TRUB2O95900 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.46■■□□□ 1.03
TRUB2O95900 FP700111.2-201ENST00000619190 1892 ntBASIC21.46■■□□□ 1.03
TRUB2O95900 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.46■■□□□ 1.03
TRUB2O95900 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB2O95900 AF201337.1-201ENST00000520239 748 ntBASIC21.46■■□□□ 1.03
TRUB2O95900 AL121832.2-201ENST00000610979 668 ntBASIC21.46■■□□□ 1.03
TRUB2O95900 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.46■■□□□ 1.03
TRUB2O95900 LINC01006-201ENST00000333319 2292 ntBASIC21.46■■□□□ 1.03
TRUB2O95900 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB2O95900 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB2O95900 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB2O95900 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
TRUB2O95900 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TRUB2O95900 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TRUB2O95900 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB2O95900 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.45■■□□□ 1.02
TRUB2O95900 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB2O95900 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.45■■□□□ 1.02
TRUB2O95900 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB2O95900 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.45■■□□□ 1.02
TRUB2O95900 AC083906.2-201ENST00000511578 360 ntBASIC21.45■■□□□ 1.02
TRUB2O95900 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.45■■□□□ 1.02
TRUB2O95900 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.45■■□□□ 1.02
TRUB2O95900 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.45■■□□□ 1.02
TRUB2O95900 AC105036.2-201ENST00000569468 176 ntBASIC21.45■■□□□ 1.02
TRUB2O95900 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.45■■□□□ 1.02
TRUB2O95900 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TRUB2O95900 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.45■■□□□ 1.02
TRUB2O95900 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB2O95900 AC073314.1-201ENST00000568729 2216 ntBASIC21.45■■□□□ 1.02
TRUB2O95900 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.45■■□□□ 1.02
TRUB2O95900 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB2O95900 LINC01521-201ENST00000504184 1943 ntBASIC21.45■■□□□ 1.02
TRUB2O95900 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB2O95900 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB2O95900 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.44■■□□□ 1.02
TRUB2O95900 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB2O95900 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.44■■□□□ 1.02
TRUB2O95900 AC027702.1-201ENST00000563810 1770 ntBASIC21.44■■□□□ 1.02
TRUB2O95900 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TRUB2O95900 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.44■■□□□ 1.02
TRUB2O95900 AC093787.1-201ENST00000450396 207 ntBASIC21.44■■□□□ 1.02
TRUB2O95900 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TRUB2O95900 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB2O95900 AP005212.1-201ENST00000581547 1997 ntBASIC21.44■■□□□ 1.02
TRUB2O95900 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB2O95900 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB2O95900 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.44■■□□□ 1.02
TRUB2O95900 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB2O95900 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.44■■□□□ 1.02
TRUB2O95900 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.43■■□□□ 1.02
TRUB2O95900 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB2O95900 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB2O95900 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB2O95900 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRUB2O95900 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB2O95900 GPX1P1-201ENST00000388829 606 ntBASIC21.43■■□□□ 1.02
TRUB2O95900 AL512625.2-201ENST00000417533 625 ntBASIC21.43■■□□□ 1.02
TRUB2O95900 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB2O95900 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.43■■□□□ 1.02
TRUB2O95900 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.43■■□□□ 1.02
TRUB2O95900 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB2O95900 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.43■■□□□ 1.02
TRUB2O95900 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRUB2O95900 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB2O95900 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB2O95900 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TRUB2O95900 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.42■■□□□ 1.02
TRUB2O95900 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms