Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.82■□□□□ 0.6
SDHAF3Q9NRP4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 MIR663A-201ENST00000385250 93 ntBASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 AL512625.2-201ENST00000417533 625 ntBASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 AF106564.1-201ENST00000607058 2553 ntBASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHAF3Q9NRP4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 PGM5P4-201ENST00000421970 445 ntBASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 AC100791.3-201ENST00000617619 330 ntBASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHAF3Q9NRP4 SLC25A24-204ENST00000569674 2357 ntBASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 CROCCP5-201ENST00000436658 830 ntBASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 AF201337.1-201ENST00000520239 748 ntBASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 AC016405.3-201ENST00000607710 860 ntBASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 AL121832.2-201ENST00000610979 668 ntBASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHAF3Q9NRP4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 AIRN-201ENST00000601203 4374 ntBASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHAF3Q9NRP4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SDHAF3Q9NRP4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SDHAF3Q9NRP4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SDHAF3Q9NRP4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAF3Q9NRP4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.76■□□□□ 0.59
SDHAF3Q9NRP4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAF3Q9NRP4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAF3Q9NRP4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAF3Q9NRP4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.76■□□□□ 0.59
SDHAF3Q9NRP4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms